]> 1.0 NIF-Organism: contains classes from BIRNLex-OrganismalTaxonomy v.1.0 (January, 2009) - Updated with simplified import hierarchy of upper level ontologies as part of the transition from NIFSTD 0.5 to 1.0. http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_376 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_591 sparql_verify_annotation_domain_and_range http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_368 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_376 sparql_verify_annotation_domain_and_range http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_376 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_473 sparql_verify_annotation_domain_and_range http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_376 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_473 sparql_verify_annotation_domain_and_range This class has been retired http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_2 http://www.ifomis.org/bfo/1.1/snap#Object true Pallid Bat 13853434 2007-08-04 2007-08-04 241550 9440 Antrozous pallidus C0324754 Pallid Bat Pallid Bat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Felidae * Taxonomic family which includes domestic and wild cats such as lions and tigers. (NCI) * The cat family in the order CARNIVORA comprised of muscular, deep-chested terrestrial carnivores with a highly predatory lifestyle. (MSH) * refers to all members of the cat family, from the breeds of domestic cats through the great cats. (CSP) 13144039 2007-07-27 2007-08-04 242152 9681 C0325089 Felidae Felidae _6_3.3.1 cat family http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Pipistrellus 13185573 2007-08-04 2007-08-04 241568 27671 C1271428 Pipistrellus Pipistrellus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Rhesus monkey 13853408 2006-10-07 2007-08-04 241653 9544 C0024400 Macaca mulatta Rhesus monkey http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 rhesus macaque rhesus macaques rhesus monkey rhesus monkeys This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). 129P3/JEmsJ 002357 129P3/JEmsJ 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 PMID: 10615122 Type: Inbred Strain Type: Segregating Inbred TJL Mating System: Sibling x Sibling (Female x Male) Species: laboratory mouse H2 Haplotype: b Appearance pink-eyed, light-bellied chinchilla Related Genotype: Aw/Aw p Tyrc-ch/p Tyrc-ch http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Mouse juvenile 2007-8-14 2007-8-14 Mouse juvenile http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_518 129S1/SvImJ 002448 129/SvImJ 129S1/Sv-p+ Tyr+ Kitl+ 129S1/SvImJ 129S3/SvIm 129S3/SvImJ 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 PMID: 10615122 Type: Inbred Strain Type: Segregating Inbred TJL Mating System: Sibling x Sibling (Female x Male) Species: laboratory mouse H2 Haplotype: b Generation: F64 (14-DEC-06) Appearance white-bellied agouti Related Genotype: Aw/Aw Important Note This strain is homozygous for Gnat2cpfl3, cone photoreceptor function loss 3, which affects bright light (photopic) vision. Strain Description Historically, the 129 inbred mice are known for the high incidence of spontaneous testicular teratomas, though the incidence differs between substrains.(1-3% in 129 parental substrains; 30% in teratoma substrains.) More recently, 129 mice are widely used in the production of targeted mutations due to the availability of multiple embryonic stem cell lines derived from them. There is major genetic variation within the 129 "family", which has led to an update of the nomenclature and a division of the substrains into three major groups: parental substrains (129P), steel substrains (129S) and "teratoma" substrains (129T). Investigators using 129 substrains for targeted mutagenesis should be careful in the selection of the appropriate 129 substrain to match the embryonic stem cell line. For a complete history of the numerous 129 substrains, see Simpson, et al., 1997. In response to challenge, 129S1/SvImJ mice develop immune-mediated nephritis characterized by proteinuria, glomerulonephritis and tubulointerstitial disease (Xie et al., 2004). Strain Development 129S1/SvImJ was developed to serve as a control inbred strain for many of the steel-derived ES cell lines (e.g. W9.5 and CJ7). SSLP marker analysis indicates that 129S1/SvImJ is identical to 129S1/Sv +p +Tyr-c KitlSl-J/+ except for the region surrounding the Kitl gene on Chr 10. 129S1/SvImJ was derived from 129S1/Sv-+p +Tyr-c KitlSl-J/+ (Stock No. 000090). The steel-Jackson mutation (KitlSl-J, formerly MgfSl-J), is segregating in Stock No. 000090. KitlSl-J was removed in 1995, at F26, by selective breeding to produce 129/Sv-+p +Tyr-c +Kitl-SlJ (Stock No. 002448, see Simpson et al., 1997). This name was later shortened to simply 129/SvImJ. Subsequently designated 129S3/SvImJ (Festing et al., 1999), this strain was renamed 129S1/SvImJ in February, 2001 to emphasize its relationship to Stock No. 000090. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Sphingidae 13143381 2007-08-03 2007-08-03 247302 7128 C0599456 Sphingidae Sphingidae hawkmoths http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Felinae 2007-07-27 2007-07-27 338152 C1270185 Felinae Felinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 129P4/RrRkJ 001198 129P4/RrRkJ 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 PMID: 10615122 Type: Inbred Strain Type: Segregating Inbred TJL Mating System: Sibling x Sibling (Female x Male) Species: laboratory mouse H2 Haplotype: b Appearance pink-eyed, light-bellied, light chinchilla Related Genotype: Aw/Aw p Tyrc-ch/p Tyrc OR albino Related Genotype: Aw/Aw p Tyrc/p Tyrc Strain Description For a complete history of the numerous 129 substrains please refer to Simpson, et al., 1997. Historically, the 129 inbred mice are known for the high incidence of spontaneous testicular teratomas, though the incidence differs between substrains. Most recently 129 mice are widely used strain in the production of targeted mutations due to the availability of several lines of embryonic stem cells. There is major genetic variation within the 129 "family", which has led to an update of the nomenclature and a division of substrains into three major groups: parental substrains, steel substrains and "ter" substrains. Investigators using 129 substrains for targeted mutagenesis should be careful in the selection of the appropriate 129 substrain to match the embryonic stem cell line. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Hominidae 13149068 2006-10-07 2006-10-07 241644 9604 Hominidae Hominidae Pongidae great apes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Felis 13185969 2007-07-27 2007-08-04 242158 9682 C0524517 Felis Felis http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Bombyx mori 14135676 197457 2007-08-03 2007-08-03 7091 Bombyx mori Bombyx mori C0323309 domestic silkworm http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 silk moth silkworm Domestic cat * The domestic cat Felis catus (NCI) * The domestic cat, Felis catus, of the carnivore family FELIDAE, comprising over 30 different breeds. The domestic cat is descended primarily from the wild cat of Africa and extreme southwestern Asia. Though probably present in towns in Palestine as long ago as 7000 years, actual domestication occurred in Egypt about 13883776 2007-07-27 2007-08-04 244501 9685 According to NCBI Taxonomy, includes Korat cats C0007450 Domestic cat Felis catus Felis domesticus Felis silvestris catus cat cats domestic cat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Orthopteroidea 2007-08-03 2007-08-03 33341 C1004425 Orthopteroidea Orthopteroidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#Infraclass Rattus rattus 10117 13808324 2006-10-07 2007-08-03 241924 C0682511 Rattus rattus Rattus rattus The laboratory rat (Rattus norvegicus) is occassionally misidentified as Rattus rattus in sequence submissions. Many of the sequence entries listed here are likely to have come from Rattus norvegicus.(NCBI Taxonomy comment). black rat house rat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy roof rat This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Saimiriinae 2007-08-02 2007-08-02 378850 GBIF does not include subfamilies under Primates. It tends to skip from Order (Primate), to Family to Genus. Saimiriinae Saimiriinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). BXD 2007-08-16 2007-08-23 A strain of inbred mouse. Inbr: F90-170 depending on substrain. Agouti. Developed by Strong in 1920 from a cross of a Bagg albino female and a DBA male. Strain CBA was selected for a low mammary tumour incidence and C3H for a high incidence. Now widely distributed, and used as a general-purpose strain. Differences between substrains are probably too large to be accounted for by mutation, and some degree of genetic contamination in the past is probable. BXD Has been used to identify a variety of loci important for a variety of nervous sytem traits. PMID: 1393606 PMID: 1632590 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/BXD.shtml Microchiroptera 2007-08-04 2007-08-04 30560 C1081646 Listed as unconfirmed name (GbifID:14845305 and GbifTaxonKeyID:1008621) in GBIF. Microchiroptera Microchiroptera http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 Dictyoptera 13141196 2007-08-03 2007-08-03 6970 C0009208 Dictyoptera Dictyoptera Note GBIF lists this as an Order, not a Superorder. Since taxon rank is just an annotation property, it doesn't affect the commensurability of the GBIF and NCBITax classification. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_780 Baboon * A genus of the subfamily CERCOPITHECINAE, family CERCOPITHECIDAE, consisting of five named species: PAPIO URSINUS (chacma baboon), PAPIO CYNOCEPHALUS (yellow baboon), PAPIO PAPIO (western baboon), PAPIO ANUBIS (or olive baboon), and PAPIO HAMADRYAS (hamadryas baboon). Members of the Papio genus inhabit open woodland, savannahs, grassland, and rocky hill country. Some authors consider MANDRILLUS a subgenus of Papio. (MSH) * Large terrestrial monkey found in Africa and Arabia; the largest non-Hominid member of the primate order. They have long dog-like muzzles, close-set eyes, heavy powerful jaws, thick fur except on their muzzle, short tail and often brightly coloured ischial callosities. (NCI) * large terrestrial monkey found in Africa and Arabia; has long doglike muzzle, large cheek pouches, and a short tail. (CSP) 13231898 2007-07-27 2007-07-27 345298 9554 Baboon C0030362 Papio _6_3.3.2.1 baboons http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Rattus 10114 13184908 2006-10-07 2007-08-03 241923 C0034721 Rattus Rattus _6_3.3.4.2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 rat rats This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Papio hamadryas 13819465 2007-07-28 2007-07-28 345299 9557 C0324820 Papio hamadryas Papio hamadryas Papio hamadryas subsp. baboon hamadryas baboon http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 red baboon sacred baboon western baboon This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Saimiri * A genus of the family CEBIDAE consisting of four species: S. boliviensis, S. orstedii (red-backed squirrel monkey), S. sciureus (common squirrel monkey), and S. ustus. They inhabit tropical rain forests in Central and South America. S. sciureus is used extensively in research studies. (MSH) * genus of the family Cebidae consisting of four species: S. boliviensis, S. orstedii (red-backed squirrel monkey), S. sciureus (common squirrel monkey), and S. ustus; they inhabit tropical rain forests in Central and South America; S. sciureus is used extensively in research studies. (CSP) 13184925 2007-08-02 2007-08-02 241648 9520 C0036055 Saimiri Saimiri _6_3.3.2.2.3 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 squirrel monkeys This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Recombinant inbred mouse strain 2007-08-16 2007-08-16 Recombinant inbred (RI) strains contain unique, approximately equal proportions of genetic contributions from two original progenitor inbred strains. Traditionally, recombinant inbred (RI) strains are formed by crossing animals of two inbred strains, followed by 20 or more consecutive generations of brother x sister matings (Bailey 1971, Taylor 1978). Alternate breeding schemes can be used, such as creating RI strain sets from Advanced Intercross Lines, where F2 animals are nonsib mated for several generations, followed ultimately by 20 or more consecutive generations of brother x sister matings. Note that if backcrossing to one of the parental strains is involved, this will create recombinant congenic strains and should be named accordingly. RI strains should be designated by uppercase one- or two-letter abbreviations of both parental strain names, with the female strain written first, and separated by an uppercase letter X with no intervening spaces. All members of RI sets involving the same two strains will be serially numbered regardless of whether they were created in one or more laboratories. (http://www.informatics.jax.org/mgihome/nomen/strains.shtml) Recombinant inbred mouse strain http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#MGI_defSource B6CBACa Aw-J/A-Kcnj6wv/J 000247 2007-08-16 2008-01-28 B6CBACa Aw-J/A-Kcnj6wv/J B6CBACa Aw-J/A-Kcnj6wv/J C0043086 Mouse, Weaver PMID: 4118891 Type: JAX GEMM Strain - Mutant Strain Type: JAX GEMM Strain - Spontaneous Mutation TJL Mating System: Outcross-Intercross (Female x Male) TJL Breeding Summary: homozygote x B6CBACa-Aw-J/A F1 then obligate heterozygote x heterozygote Species: laboratory mouse Generation: N68F1 (07-NOV-05) Appearance white-bellied agouti, ataxic Related Genotype: Aw-J/? Kcnj6wv/Kncj6wv OR agouti, ataxic Related Genotype: A/A Kcnj6wv/Kncj6wv OR white-bellied agouti, unaffected Related Genotype: Aw-J/? +/? or Aw-J/A Kncj6wv/+ OR agouti, unaffected Related Genotype: A/A +/? or A/A Kncj6wv/+ Strain Description Mice homozygous for the weaver spontaneous mutation (Kcnj6wv) are recognizable in the second postnatal week by their small size, instability of gait, weakness, and hypotonia. Many homozygous mutant mice die at weaning age, but some survive to adulthood, and females may breed. The cerebellum in homozygous mutants is very small, simple, and almost devoid of granule cells, which degenerate during the second week. Heterozygotes behave normally, but they have a smaller than normal cerebellum with a deficiency of granule cells, some of which fail to migrate into the internal granule layer and remain scattered in the molecular layer. Evidence from cultures of mutant and normal cerebellum show that granule cells of wv/wv and wv/+ mice have gene-dosage dependent abnormalities in morphology and cell behavior. Studies using homozygous weaver/wildtype chimeras indicate that the migration defect of granule cells is intrinsic to the granule cells themselves. The disarrangement of Purkinje cells, however, is not caused by intrinsic action of weaver in these cells. Cell mixing experiments also suggest Kcnj6wv acts non-autonomously and encodes a membrane-associated ligand that induces external germinal layer neuron differentiation. Strain Development Weaver (Kcnj6wv) arose spontaneously in the pedigreed expansion stocks of C57BL/6J at The Jackson Laboratory in 1961. It was maintained by mating tested pairs until F21. Ovarian transplantation to C57BL/6J was used to F21N3 and then because of poor breeding performance a weaver (wv/wv) male was outcrossed to a CBA/Ca female and the tested offspring (wv/+) were mated to the B6CBACa hybrids. Backcrossing to the hybrid B6CBACa was then made each generation by mating a homozygous female weaver to a hybrid and mating the known heterozygotes. The stock was at N46 in 1992. It was cryopreserved in 1986 by mating heterozygous females to heterozygous males at N30-N32 or by mating homozygous females to B6CBACa F1 males. Weaver Mice Weaver Mouse http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_725 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_813 Vespertilionidae 13144000 2007-08-04 2007-08-04 241528 9431 C0324747 Vespertilionidae Vespertilionidae common bats http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 vespertilionid bats Platyrrhini 2007-07-28 2007-07-28 9479 C1135182 New World monkeys Platyrrhini Platyrrhini _6_3.3.2.2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_784 monkey monkeys This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Brown capuchin 13803515 2007-08-02 2007-08-02 345225 9515 Brown capuchin C0999514 Cebus apella black-capped capuchin brown capuchin brown-capped capuchin http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Guenon 13184930 2006-10-07 2007-08-06 345253 9533 C0007753 Cercopithecus Guenon guenon http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). BXH 2007-08-16 2007-08-23 BXH Inbr 30+. Set of 13 recombinant inbred strains developed by B.A.Taylor from C57BL/6J x C3H/HeJ. Maint. by Ty. Strain BXH2 develop myeloid leukemia as a result of the expression of an ecotropic murine leukaemia virus that acts as an insertional mutagen altering the expression of cellular proto-oncogenes. This is not passed through the germ line, but is passed from one generation to the next by horizontal transmission (Bedigian et al, 1993). A homeobox locus Meis1 is the site of viral integration in 15% of tumours (Moskow et al, 1995). http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/BXH.shtml Invertebrate * Animals that have no spinal column. (MSH) * general category of the kingdom Animalia (multicellular animals) including those phyla whose members lack a notochord; ie, all animals except vertebrates in the phylum Chordata. (CSP) 2007-06-03 2007-08-03 C1004398 Invertebrate _6_2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Eptesicus 13186062 2007-08-04 2007-08-04 241551 29077 C1271540 Eptesicus Eptesicus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Palinuridae 13148613 2007-08-03 2007-08-03 254762 6731 C0446343 Palinuridae Palinuridae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 spiny lobsters C3HeB/FeJ 000658 2006-10-07 2007-08-03 A substrain of the CH3 laboratory mouse. From Jackson Laboratories: This strain does not carry mouse mammary tumor virus (MMTV). See JAX Notes, May 2000, #480. This strain is also homozygous for the retinal degeneration allele Pde6brd1. From JAX catalog: Type: Inbred Strain TJL Mating System: Sibling x Sibling (Female x Male) Species: laboratory mouse H2 Haplotype: k Generation: F201 (14-DEC-06) Appearance: agouti Related Genotype: A/A C3Fe C3H Fekete C3HeB/FeJ HeB http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Rob_Williams http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/C3H.shtml Saimiri ustus 13838664 2007-08-02 2007-08-02 345233 66265 C1025781 Saimiri ustius Saimiri ustus Saimiri ustus bare-eared squirrel monkey http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). big brown bat 13853442 2007-08-04 2007-08-04 241552 29077 C0324751 Eptesicus fuscus big brown bat big brown bat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Palinurus 13179947 2007-08-03 2007-08-03 327755 6732 C0998245 Palinurus Palinurus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Panulirus 13181156 2007-08-03 2007-08-03 254763 6734 C0998247 Panulirus Panulirus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Callitrichinae 13149062 2007-08-02 2007-08-02 345140 9480 C0006763 Callithricidae Callitrichidae Callitrichinae Callitrichinae GBIF does not include subfamilies under Primates. It tends to skip from Order (Primate), to Family to Genus. NCBI Tax considers this taxon to be synonymous with Callitrichidae, which GBIF considers to be a Family at the same level as Cebidae. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 marmosets and tamarins This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Drosophiliti 186285 2007-08-03 2007-08-03 C1210199 Drosophiliti Drosophiliti http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Phyllostomidae 13144005 2007-08-04 2007-08-04 241602 9415 American leaf-nosed and vampire bats C0324760 Phyllostomatidae Phyllostomidae Phyllostomidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 leaf-nosed bats Aves * Warm-blooded VERTEBRATES possessing FEATHERS and belonging to the class Aves. (MSH) * warmblooded oviparous tetrapods with feathers, one occipital condyle, forelimb modified into wings, heart with 2 ventricles. (CSP) 13140955 2007-06-03 207601 8782 April 27, 2010 Aves Aves Avian C0005595 _6_3.1 bird birds http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_779 Callianassoidea 13142339 177244 2007-08-03 2007-08-03 C1202916 Callianassoidea Callianassoidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Common spiny lobster 13878154 2007-08-03 2007-08-03 415127 6733 C0998246 Common spiny lobster Common spiny lobster European spiny lobster Palinurus elephas Palinurus vulgaris http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Caribbean spiny lobster 13181156 2007-08-03 2007-08-03 415120 6737 C0998250 Caribbean spiny lobster Caribbean spiny lobster Panulirus argus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Saguinus 13191133 2007-08-02 2007-08-02 345161 9486 C0036052 Saguinus Saguinus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Drosophila 13168758 2007-08-03 2007-08-03 222114 7215 C0013138 Drosophila Drosophila Drosophila Fallen, 1823 fruit flies http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Saguinus midas midas 1010563 14869524 2007-08-02 2007-08-02 78354 Saguinus midas midas Saguinus midas midas http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Carolliinae 2007-08-04 2007-08-04 40231 C1271376 Carolliinae Carolliinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 Neognathae 2007-06-03 2007-06-03 8825 C1081164 Neognathae Neognathae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_780 Callianassidae 13143619 177236 2007-08-03 2007-08-03 258000 C1202908 Callianassidae Callianassidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 129P1/ReJ 001137 129P1/ReJ 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 PMID: 10615122 Type: Inbred Strain Type: Segregating Inbred TJL Mating System: Sibling x Sibling (Female x Male) Species: laboratory mouse H2 Haplotype: b Generation: F155 (18-OCT-06) Appearance pink-eyed, light-bellied chinchilla Related Genotype: Aw/Aw p Tyrc-ch/p Tyrc-ch Important Note This strain is homozygous for Cdh23ahl, the age related hearing loss 1 mutation, which on this background results in progressive hearing loss with onset between 3 and 5 months of age. Strain Description For a complete history of the numerous 129 substrains please refer to Simpson, et al., 1997. Historically, the 129 inbred mice are known for the high incidence of spontaneous testicular teratomas, though the incidence differs between substrains. Most recently 129 mice are widely used strain in the production of targeted mutations due to the availability of several lines of embryonic stem cells. There is major genetic variation within the 129 "family", which has led to an update of the nomenclature and a division of substrains into three major groups: parental substrains, steel substrains and "ter" substrains. Investigators using 129 substrains for targeted mutagenesis should be careful in the selection of the appropriate 129 substrain to match the embryonic stem cell line. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Astacidea 2007-08-03 2007-08-03 6730 Astacidea Astacidea Astacura C0998234 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_783 Apis mellifera carnica 2007-08-03 2007-08-03 88217 Apis mellifera carnica Apis mellifera carnica Apis mellifera carnica Pollmann, 1879 Carniolan honeybee http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 Saguinus midas 13832338 2007-08-02 2007-08-02 30586 345169 C0324809 Midas tamarin Saguinus midas Saguinus midas http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Sophophora 2007-08-03 2007-08-03 32341 C1081759 Sophophora Sophophora http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_789 Lepidoptera 13141205 197175 2007-08-03 2007-08-03 7088 Lepidoptera Lepidoptera butterflies and moths http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 moths moths Saguinus niger 2007-08-02 2007-08-02 356665 C1629563 Saguinus midas niger Saguinus niger Saguinus niger black-handed tamarin http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Galliformes 13141258 2007-06-03 2007-06-03 237105 8976 C0325589 Galliformes Galliformes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 Rat 10116 13808331 2006-10-05 2007-08-04 241925 A mammal of the rodent order and genus rattus. Most laboratory rats are derived from the species Rattus norvegicus, the most common parent species for most laboratory strains Buffalo rat C0034693 Gunn rats Norway rat Rat Rattus PC12 clone IS Rattus norvegicus Rattus rattiscus Sprague-Dawley rat Wistar rats brown rat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 laboratory rat rat rats zitter rats This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Mus musculus musculus 14764254 2006-10-07 2007-08-05 39442 526294 Mus musculus hortulanus Mus musculus musculus Mus musculus musculus eastern European house mouse http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Callianassa 13179658 2007-08-03 2007-08-03 327595 338195 C1650047 Callianassa Callianassa http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Nephropoidea 13827951 2007-08-03 2007-08-03 37849 C1082135 Nephropoidea Nephropoidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Amphiesmenoptera 2007-08-03 2007-08-03 85604 Amphiesmenoptera Amphiesmenoptera http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_780 Glossata 2007-08-03 2007-08-03 41191 Glossata Glossata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 Murinae 2006-10-07 2006-10-07 39107 C1007978 Murinae Murinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Mouse 10090 13819904 2006-10-07 2007-08-03 241928 A mammal of the rodent order and genus Mus (MM). C0025914 Mouse Mus muscaris Mus musculus Mus musculus Strain information and hierarchy are largely based on the recommended nomenclature developed by the Mouse Genomics Institute of Jackson Laboratories. There is some confusion regarding the use of the "J" designation in some cases. house mouse http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Rob_Williams http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 mouse This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Bay ghost shrimp 13828748 177238 2007-08-03 2007-08-03 327612 Bay ghost shrimp Bay ghost shrimp C1202910 Callianassa californiensis GBIF lists this under the Genus Neotrypaea, while NCBI lists it under Callianassa. Going with GBIF, since they have determined it is a synonym for Callianassa californiensis (gbif: 13878182). Neotrypaea californiensis http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Nephropidae 13148605 2007-08-03 2007-08-03 327692 6704 C0023932 Homaridae Nephropidae Nephropidae clawed lobsters http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Neolepidoptera 2007-08-03 2007-08-03 41196 Neolepidoptera Neolepidoptera http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_783 Mus musculus domesticus 10092 14764250 2006-10-07 2007-08-05 567644 C0751318 Mus domesticus Mus musculus domesticus Mus musculus domesticus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 western European house mouse This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Arhynchobdellida 13141158 2007-08-03 2007-08-03 259430 27386 Arhynchobdellae Arhynchobdellida Arhynchobdellida Arhynchobdelliformes C1001462 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 Callianassa subterranea 13828394 2007-08-03 2007-08-03 327668 338196 C1650574 Callianassa subterranea Callianassa subterranea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 129S6/SvEvTac 129S6/SvEvTac 2007-08-23 2007-08-23 809 Model Description * Progenitors of this strain used extensively to establish Embryonic Stem (ES) cell lines (e.g., W4) for the production of targeted mutation (knockout) mice * Targeted mutation mice developed from 129 agouti ES cell lines can often be maintained with maximum genomic homozygosity by mating chimeras to the 129S6 strain * Taconic's 129 mice are of the Steel ('S') subline. Origin Taconic received 129S6 inbred model stock from GenPharm International from two sublines originating from Dr. Martin Evan's colony in 1992. The mice were derived by embryo transfer in 1993. The resulting offspring were heterozygous at Gpi1 for the 'a' and 'c' alleles. Homozygous Gpi-1c brother x sister mice were selected in the Foundation Colony at F8 and became the common ancestors for all subsequent Taconic breeders. The Taconic foundation colony was at F42 in 2005. Color: White-bellied Black Agouti Coat Color Loci: Aw Genetics: * Strain Profile: Acy1s, Akp1b, Amy1a, Apoa1b, Car2a, Es1b, Es3c, Esdb, Es11a, Ggca, Glo1a, Got2b, Gpi1c, Gpt1a, Gr1a, Gus-sb, H6pdb, Hbbd, Idh1a, Ldr1a, Mod1a, Mpi1b, Neu1b, Pep3b, Pgm1b, Pgm2a, Pnpa, Trfb, Sod1a * Immunology: H2b * Other: Ptprc http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#TacFarms http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Sphinginae 2007-08-03 2007-08-03 82616 C1035564 Sphinginae Sphinginae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 small-eyed sphinx moth Hirudiniformes 13141158 2007-08-03 2007-08-03 259430 6416 C0998039 Hirudiniformes Hirudiniformes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 Estrildidae 14719700 2007-07-27 2007-07-27 37611 C1006965 Estrildidae Estrildidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Manduca 13158626 2007-08-03 2007-08-03 7129 C0242620 Manduca Manduca http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 B6129SF1/Tac 2007-08-23 2008-01-28 B6129 B6129F1 B6129SF1/Tac Model Description * Used primarily as a control for studies involving the use of targeted mutation mice on a mixed background originating from 129 ES cell based chimeras that were subsequently mated to C57BL/6 mice * Not genetically identical to these mixed background targeted mutation models, instead they approximate, in a consistent manner, the genetic mix that may be present in such models . Origin: The B6129F1 hybrid model is developed by intercrossing C57BL/6NTac female mice to 129S6/SvEvTac male mice from Taconic US's commercial colonies. Color: White-Bellied Agouti Genetics: For genetic comparisons and pertinent data, refer to "Genetics" for the parent strains of this hybrid. The B6129F1 will be heterozygous at the loci where the C57BL/6 and the 129/SvEv differ, and homozygous at the loci where they are the same. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#TacFarms http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Bombycoidea 13142257 2007-08-03 2007-08-03 37569 Bombycoidea Bombycoidea C1006943 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Hirudinidae 13142476 2007-08-03 2007-08-03 341675 6417 C0998040 Hirudinidae Hirudinidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Sarcopterygii 2007-06-03 2007-06-03 8287 C1081145 Sarcopterygii Sarcopterygii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Manduca sexta 14129753 2007-08-03 2007-08-03 553041 7129 C0242619 Carolina sphinx Manduca sexta Manduca sexta hornblower http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 tobacco hawkmoth tobacco hornworm tomato hornworm Bombyciformes 119258 2007-08-03 2007-08-03 Bombyciformes Bombyciformes C1057192 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Decapoda 13141225 2007-08-03 2007-08-03 218459 6683 C0323856 Decapoda Decapoda http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 Hirudo 13241426 2007-08-03 2007-08-03 391112 6420 C0579183 Hirudo Hirudo http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Peruvian guinea pig 2007-08-06 2007-08-06 C0324526 Peruvian guinea pig Peruvian long-haired guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 http://research.uiowa.edu/animal/?get=g_pig This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Euteleostomi 117571 2007-06-03 2007-06-03 C1056207 Euteleostomi Euteleostomi bony vertebrates http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Inbred mouse strain 2006-10-05 2007-08-05 Currently (2006-10-07), the children of this class have been made mutually disjoint. In reality, there may be some mixing amongst strains - e.g., some strains and substrains were derived from crosses of other inbred strains. Ultimately, the disjoint sets will need to be worked out very carefully, but this approximately is kept for now as it will likely do no harm and serve as a reminder that this issue may require more thorough review in the future. Genetically identical individuals developed from brother and sister matings which have been carried out for twenty or more generations, or by parent x offspring matings carried out with certain restrictions. All animals within an inbred strain trace back to a common ancestor in the twentieth generation. Inbred mouse strain http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#MeSH_defSource Bombycidae 13143282 197455 2007-08-03 2007-08-03 7089 Bombycidae Bombycidae C0994382 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 silkworm moths Pleocyemata 2007-08-03 2007-08-03 6692 C0323856 Pleocyemata Pleocyemata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 Medicinal leech 13787299 2007-08-03 2007-08-03 391113 6420 C1262478 Hirudo medicinalis Medicinal leech http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 medicinal leech Teleostomi 117570 2007-06-03 2007-06-03 C1056206 Teleostomi Teleostomi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Pongo 13184943 2006-10-07 2006-10-07 345364 9599 C0178448 Pongo Pongo http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). DBA/2HaSmnJ 000973 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 DBA/2HaSmnJ PMID: 10615122 Type: Inbred Strain Species: laboratory mouse H2 Haplotype: d Generation: F?+2p Appearance: dilute brown Related Genotype: a/a Tyrp1b/Tyrp1b Myo5ad/Myo5ad http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Bombyx 13150364 197456 2007-08-03 2007-08-03 7089 Bombyx Bombyx C0037119 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 C57BL 2006-10-05 2007-08-14 A strain of laboratory mouse. It is probably the most widely used of all inbred strains, (substrain C57BL/6 alone accounts for over 14% of occasions on which an inbred strain is used) though in many ways it seems to be atypical of inbred strains of laboratory mice. In contrast to 36 other standard inbred strains, it carries a Y chromosome of Asian Mus musculus origin (c.f. AKR and SWR) (Tucker et al 1992), and a LINE-1 element derived from Mus spretus the frequency of which suggests that up to 6.5% of the genome may be of M. spretus origin (Rikke et al, 1995). C57BL Jax black subline derived from Little (1921) line which derived from original Lathrop stock (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). One of the first inbred strains developed in the early 20th century, derived from the first inbred strain DBA. DBA was developed by Little in 1909 - D ["dilute"], B ["brown"], A["non-agouti"]. (Staats, J. The laboratory mouse. in Biology of the Laboratory Mouse (ed. Green, E.L.) 1-9 (McGraw-Hill, New York, 1966)). PMID:10615122 PMID:1353382 PMID:7713440 The phenotypic and genotypic similarity between any two related strains depends on the extent to which the parental colony was inbred at the time the strains were separated, and whether other strains contributed to the parentage of either strain. For example, C57BL/6 and C57BL/10 were separated in 1921, at a time when the parental C57BL colony was substantially inbred, and no other strains are known to have contributed to the parentage of either strain. (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Rob_Williams http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Palinura 2007-08-03 2007-08-03 6712 C0998244 Palinura Palinura Palinuridea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_783 true lobsters and crayfishes Pseudocoelomata 2007-06-03 2007-08-03 33217 C1081802 Pseudocoelomata Pseudocoelomata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Organism A biomaterial object capable of reproduction and harvesting energy from some biomaterial source in order to sustain its existance. Bill Bug February 18, 2010 Organism Organismal object This part of the graph will need to adjust as organism taxonomy is handled more consistently by the biomedical-ontology community insect macaque monkey organism procaryote vascular plant Hildebrandts horseshoe bat 13810749 2007-08-04 2007-08-04 302411 528127 C1669804 Hildebrandt's horseshoe bat Hildebrandts horseshoe bat Rhinolophus hildebrandti Rhinolophus hildebrandtii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Gnathostomata 2007-06-03 2007-06-03 7776 C0998765 Gnathostomata Gnathostomata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_778 jawed vertebrates Furth Wistar rat 2007-08-13 2007-08-13 C0034707 Furth Wistar rat Furth Wistar rat Furth Wistar rats Inbred WF Rat Rat, Inbred WF Rat, WF Rats, Inbred Wistar Furth Rats, WF Rats, Wistar Furth WF Rat WF Rats WF Rats, Inbred http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_796 Rat strain 2006-10-07 2006-10-07 Common laboratory rat strains derived from Rattus norvegicus (BB). Rat strain Rat_strain http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_19 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_21 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_56 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_160 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_203 true Orangutan 13803554 2006-10-07 2006-10-07 345365 9600 C0032638 Orangutan Pongo pygmaeus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 orang-utan orangutan This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Percomorpha 2007-07-27 2007-07-27 32485 C1004175 Percomorpha Percomorpha http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 BALB/c 2006-10-05 2007-08-14 BALB/c BALBc Jax subline (Snell, 1935) derived from Bagg stock (Memorial Hospital, NY, 1913) (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). One of the first inbred strains developed in the early 20th century, derived from the first inbred strain DBA. DBA was developed by Little in 1909 - D ["dilute"], B ["brown"], A["non-agouti"]. (Staats, J. The laboratory mouse. in Biology of the Laboratory Mouse (ed. Green, E.L.) 1-9 (McGraw-Hill, New York, 1966)). PMID:10615122 PMID:17246776 The sensitivity of BALB/c and C3H mice to mutagenesis by ethyl nitrosourea (ENU) has been valuable in mutagenesis programmes (Mouse mutagenesis consortium, http://www.mgu.har.mrc.ac.uk/mutabase/; German Human Genome Project, http://www.gsf.de/isg/groups/enu-mouse.html). (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS http://www.informatics.jax.org/external/festing/mouse/docs/BALB.shtml DBA/8BiDsmJ 002860 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 DBA/8BiDsmJ PMID: 10615122 Type: Inbred Strain Species: laboratory mouse H2 Haplotype: d Generation: F?+2p Appearance: dilute brown Related Genotype: a/a Tyrp1b/Tyrp1b Myo5ad/Myo5ad http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Palinuroidea 115587 13142410 2007-08-03 2007-08-03 C1055043 Palinuroidea Palinuroidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Eptesicus bottae 1026786 13816923 169057 2007-08-04 2007-08-04 Botta's Serotine C1197387 Eptesicus bottae Eptesicus bottae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Signal crayfish 13828545 2007-08-03 2007-08-03 414808 6720 C0998238 Pacifastacus leniusculus Signal crayfish http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 signal crayfish Kyoto Wistar rat 2007-08-13 2007-08-13 A strain of Rattus norvegicus used as a normotensive control for the spontaneous hypertensive rats (SHR). (MSH) C0034709 Inbred WKY Rat Inbred WKY Rats Kyoto Wistar rat Kyoto Wistar rats Rat, Inbred WKY Rat, WKY Rats, Inbred WKY Rats, WKY Rats, Wistar Kyoto WKY Rat WKY Rat, Inbred WKY Rats WKY Rats, Inbred http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_796 Vertebrata 2007-06-03 2007-06-03 7742 C0042567 Vertebrata Vertebrata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy vertebrates CBA 2006-10-05 2007-08-14 A strain of inbred mouse. Inbr: F90-170 depending on substrain. Agouti. Developed by Strong in 1920 from a cross of a Bagg albino female and a DBA male. Strain CBA was selected for a low mammary tumour incidence and C3H for a high incidence. Now widely distributed, and used as a general-purpose strain. Differences between substrains are probably too large to be accounted for by mutation, and some degree of genetic contamination in the past is probable. CBA Derived from Strong's CB stock which were themselves derived from the original Lathrop stock by way of Little's DBA stock (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). One of the first inbred strains developed in the early 20th century, derived from the first inbred strain DBA. DBA was developed by Little in 1909 - D ["dilute"], B ["brown"], A["non-agouti"]. (Staats, J. The laboratory mouse. in Biology of the Laboratory Mouse (ed. Green, E.L.) 1-9 (McGraw-Hill, New York, 1966)). PMID:10615122 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Rob_Williams http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/CBA.shtml Sprague Dawley 2006-10-05 2006-10-05 A strain of albino laboratory rat. Sprague Dawley Sprague_Dawley http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_20 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_391 true Sauropsida 2007-06-03 2007-06-03 8457 C0999063 Sauropsida Sauropsida http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy sauropsids Lagomorpha 13142107 2007-08-03 2007-08-03 241658 9975 C0022962 Lagomorpha Lagomorpha http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#graph_position_temporary http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 rabbits & hares This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Chiroptera 13141270 2007-08-04 2007-08-04 241527 9397 C0008139 Chiroptera Chiroptera bats bats http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 Archosauria 2007-06-03 2007-06-03 8492 Archosauria Archosauria C0999075 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy 129 Mouse strain 129 2007-08-14 2007-08-15 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 Inbr and colour depends on substrain (see below). Origin: Dunn 1928 from crosses of coat colour stocks from English fanciers and a chinchilla stock from Castle. This strain has a common origin with strain 101. Most substrains carry the white-bellied agouti gene AW though only a subset have the agouti pattern as many carry albino or chinchilla and/or the pink-eyed dilution gene, p, which is derived from Asian mice of the Mus musculus type (see also strains SJL, P/J and FS/Ei) (Brilliant et al, 1994). It is known for the high incidence of spontaneous testicular teratomas, though the incidence differs between substrains, but more recently it has been the most widely used strain in the production of targeted mutations due to the availability of several lines of embryonic stem cells. Two recent studies show that there is major genetic variation within the 129 "family", at least some of which must be attributed to genetic contamination (Threadgill et al, 1997,Simpson et al, 1997). Strain 129/SvJ was genetically contaminated in about 1978 by an unknown strain, and differs from other 129 substrains at about 25% of SSLP genetic markers. Threadgill et al suggest that it is equivalent to a recombinant congenic strain and suggest that it is designated 129cX/Sv. Simpson et al recognised three major groups of substrains: parental substrains, steel substrains and "ter" substrains. Threadgill et al identified substrains 129/Ola, 129/J, 129/Sv, 129/ReJ and 129/RrRk, and the associated embryonic stem cells. Clearly, major revision of the nomenclature of this group of strains is necessary. This will be undertaken in the next revision. In the mean time, people doing targeted mutagenesis should take special care to ensure that the genotype of their embryonic stem cell culture matches the substrain of mice which they use. PMID: 10615122 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/129.shtml Callinectes 13181032 2007-08-03 2007-08-03 416089 6762 C0998272 Callinectes Callinectes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Sauria 2007-06-03 2007-06-03 32561 C1004231 Diapsida Sauria Sauria diapsids http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Craniata 2007-06-03 2007-06-03 89593 C1039837 Craniata Craniata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_777 Leporidae 13149047 2007-08-03 2007-08-03 241663 9979 C0999629 Leporidae Leporidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#graph_position_temporary http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 rabbits and hares This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Hybrid strains of mus musculus musculus x domesticus 14749311 2006-10-07 2008-04-23 477815 Genomic polymorphism analysis (RFLP) indicates "these strains cannot be regarded as archetypes of M.m. domesticus as suggested by protein polymorphisms and mitochondrial DNA sequence analysis, but rather as genetic hybrids between the two subspecies" (C.E. Bishop, et al., Most classical Mus musculus domesticus laboratory mouse strains carry a Mus musculus musculus Y chromosome, Nature, 1985, v315, p70). Hybrid strains of mus musculus musculus x domesticus Mus musculus musculus x domesticus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import listed as the Nothospecies 'Mus musculus musculus x domesticus' in GBIF. A Nothospecies is a hybrid that has received an official name. This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Dinosauria 2007-06-03 2007-06-03 436486 Dinosauria Dinosauria http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy European rabbit 13853340 2007-08-03 2007-08-20 241685 9986 C0034493 European rabbit European rabbit Japanese white rabbit Lepus cuniculus New Zealand rabbit Oryctolagus cuniculus The species Oryctolagus cuniculus, in the family Leporidae, order LAGOMORPHA. Rabbits are born in burrows, furless, and with eyes and ears closed. In contrast with HARES, rabbits have 22 chromosome pairs. (MSH) _6_3.3.3 domestic rabbit http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#graph_position_temporary http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 rabbit rabbits This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Primate 13142116 2006-10-05 2007-08-04 241643 9443 C0033147 Primata Primate Primate Primate http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 primates This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Adult 2007-08-16 2007-08-16 Adult _8.2_3 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_681 true Blue crab 13814698 2007-08-03 2007-08-03 416090 6763 Blue crab C0998273 Callinectes sapidus blue crab http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Oryctolagus 13193762 2007-08-03 2007-08-20 241684 9984 C0999632 Oryctolagus Oryctolagus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Saurischia 2007-06-03 2007-06-03 436489 Saurischia Saurischia http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Homo 13248244 2006-10-07 2006-10-07 241645 9605 C1300203 Homo Homo http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Glires 2006-08-04 2006-10-07 314147 C1640874 Glires Glires Rodents and rabbits http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Elderly 2007-08-16 2007-08-16 Elderly _8.2_4 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_691 true Xenopus 2007-08-04 2007-08-04 262014 Xenopus Xenopus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_789 Theropoda 2007-06-03 2007-06-03 436491 Theropoda Theropoda http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Euarchontoglires 2006-10-07 2006-10-07 314146 C1670686 Euarchontoglires Euarchontoglires http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_780 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Homo Pan Gorilla group 2006-10-07 2006-10-07 207598 C1224354 Homo Pan Gorilla group Homo_Pan_Gorilla_group http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Phasianidae 13143939 2007-06-03 2007-06-03 237106 9005 C0325635 Phasianidae Phasianidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 turkeys Human Prenatal 2007-8-14 2007-8-14 Human Prenatal http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_477 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_516 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_7015 Xenopus laevis 13838293 2007-08-04 2007-08-04 234719 8355 African Clawed Frog African clawed frog C0043343 Xenopus laevis Xenopus laevis clawed frog http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Oryctolagus cuniculus cuniculus 13853340 2007-08-20 2007-08-20 569424 Oryctolagus cuniculus cuniculus Oryctolagus cuniculus cuniculus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#GBIF http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Coelurosauria 2007-06-03 2007-06-03 436492 Coelurosauria Coelurosauria http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Catarrhini 2006-10-07 2006-10-07 9526 C0999519 Catarrhini Catarrhini http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_784 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Phasianinae 2007-06-03 2007-06-03 9072 C0999305 Phasianinae Phasianinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 Gallus 13183408 2007-06-03 2007-06-03 237449 9030 C0999287 Gallus Gallus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Human newborn 2007-8-14 2007-8-14 Human newborn http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_516 Calico crayfish 13791971 2007-08-03 2007-08-03 306176 414922 C1685627 Calico crayfish Calico crayfish Orconectes immunis http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Rusty crayfish 13792650 2007-08-03 2007-08-03 258719 414900 C1496899 Orconectes rusticus Rusty crayfish Rusty crayfish http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Appalachian brook crayfish 16103107 2007-08-03 2007-08-03 306142 414820 Appalachian brook crayfish Appalachian brook crayfish C1688715 Cambarus bartoni Cambarus bartonii Note this is given as unspecified with a Kingdom: Unknown in BGIF. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Oryctolagus cuniculus huxleyi 13908755 1476926 2007-08-20 2007-08-20 Oryctolagus cuniculus huxleyi Oryctolagus cuniculus huxleyi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#GBIF http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_792 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Mammal * Any warm-blooded vertebrate having the skin more or less covered with hair; young are born alive except for the small subclass of monotremes and nourished with milk. (NCI) * Warm-blooded vertebrate animals belonging to the class Mammalia, including all that possess hair and suckle their young. It includes three major groups: placentals and marsupials, which are viviparous, and monotremes, which are oviparous. (Dorland, 28th ed.) (MSH) * warm-blooded chordates with hair, 7 cervical vertebrates, 4 chambered heart, 5 or fewer digits on each limb, mammary glands with milk for feeding young; can be terrestrial, aerial or aquatic. (CSP) 13140957 2006-10-07 2007-08-04 215038 40674 C0024660 Mammal Mammal Mammalia _6_3.3 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_779 mammals mammals mammals This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Coturnix 13182121 2007-06-03 2007-06-03 237366 9090 C0010199 Coturnix Coturnix http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Wistar Rat 2007-08-05 2007-08-05 A strain of albino rat developed at the Wistar Institute that has spread widely at other institutions. This has markedly diluted the original strain. C0034716 Wistar Rat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 Eunemobius 13228713 188727 2007-08-03 2007-08-03 Eunemobius Eunemobius Note this Genus is not listed in NCBITax. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Simiiformes 2006-10-07 2006-10-07 314293 Anthropoidea C1564897 Simiiformes Simiiformes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_783 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Japanese quail 13795302 2007-06-03 2007-06-03 237371 93934 C0022345 Coturnix coturnix japonica Coturnix japonica Japanese quail Japanese quail http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Human infant 2007-8-14 2007-8-14 Human infant http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_516 Procericambarus 2007-08-03 2007-08-03 306269 C1686424 Procericambarus Procericambarus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_789 Crockerinus 2007-08-03 2007-08-03 306275 C1689164 Crockerinus Crockerinus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_789 Pterygota 2007-08-03 2007-08-03 7496 C0998616 Pterygota Pterygota http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 winged insects DBA/2 2007-08-14 2007-08-15 C1511649 DBA/2 _6_3.3.4.1.2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Rodent * A mammalian order which consists of 29 families and many genera. (MSH) * Taxonomic group that includes mice, rats, guinea pigs, squirrels, beavers, and many others. (NCI) * rodents; the largest order of placental mammals (class Eutheria), all possessing one pair of chisel-like upper incisors for gnawing and flat-crowned premolars and molars for grinding; it includes the mice, rats, guinea pigs, squirrels, beavers, and many more. (CSP) 13142118 2006-10-05 2007-08-20 241687 9989 C0035804 Rodent Rodentia Rodentia _6_3.3.4 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#graph_position_temporary http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 rodents This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Amniota 2007-06-03 2007-06-03 32524 Amniota Amniota C1004207 amniotes http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy Eunemobius carolinus 14194635 188728 2007-08-03 2007-08-03 Eunemobius carolinus Eunemobius carolinus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Sprague Dawley 2007-08-05 2007-08-13 A strain of albino rat used widely for experimental purposes because of its calmness and ease of handling. It was developed by the Sprague-Dawley Animal Company. (MSH). C0034715 Rats, Sprague Dawley Sprague Dawley Sprague-Dawley rat Sprague-Dawley rats http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 Chicken * Common name for the species Gallus gallus, the domestic fowl, in the family Phasianidae, order GALLIFORMES. It is descended from the red jungle fowl of SOUTHEAST ASIA. (MSH) * The common domestic fowl, Gallus gallus. (NCI) * common name for the species Gallus gallus, the domestic fowl; descended from the red jungle fowl of Southeast Asia. (CSP) 13836020 2007-06-03 237449 9031 April 27, 2010 C0008051 Chicken Gallus domesticus Gallus gallus Gallus gallus Gallus gallus domesticus Gallus gallus domesticus Red junglefowl _6_3.1.1 bantam chicken chickens dwarf Leghorn chickens http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 red junglefowl Neognathi 186839 2007-07-27 2007-07-27 C1210591 Neognathi Neognathi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Neoptera 2007-08-03 2007-08-03 33340 C1081809 Neoptera Neoptera http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#Subclass Hystricognathi 2007-08-06 2007-08-06 33550 C1271396 Hystricognathi Hystricognathi Hystricomorpha http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Euteleostei 2007-07-27 2007-07-27 32447 C1081773 Euteleostei Euteleostei http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Deuterostomia 2007-06-03 2007-06-03 33511 C1004546 Deuterostomia Deuterostomia http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Neoteleostei 123365 2007-07-27 2007-07-27 C1059401 Neoteleostei Neoteleostei http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Caviidae 10139 13149084 2007-08-06 2007-08-06 356667 C1272860 Caviidae Caviidae cavies http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Insecta * Insects are a class, Insecta, of Arthropoda whose members are characterized by division into three parts: head, thorax, and abdomen. They are the dominant group of animals on earth, several hundred thousand different kinds having been described. They have lived on earth for about 350 million years, as compared with less than 2 million for man. While insects are often commercially valuable and useful as scavengers, many species are harmful, causing enormous losses in agriculture and storage. Three orders, HEMIPTERA; DIPTERA; and Siphonaptera; are of medical interest in that they cause disease in man and animal. (From Dorland, 27th ed; Borror et al., An Introduction to the Study of Insects, 4th ed, p1) (MSH) * have 3 pairs of legs, 3 body regions, 1 pair of antennae, and often 1-2 pairs of wings; 26 Orders, 703,500 known species. (CSP) 13140937 186841 2007-08-03 50557 August 20, 2009 C0021585 Insect Insecta Insecta Insects _6_2.2.2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_779 true insects Endopterygota 2007-08-03 2007-08-03 33392 C1004458 Endopterygota Endopterygota Holometabola http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#Infraclass greater horseshoe bat 13808775 2007-08-04 2007-08-04 528123 59479 C1021558 Rhinolophus ferrumequinum greater horseshoe bat greater horseshoe bat horseshoe bats http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Crustacea * A large subphylum of mostly marine ARTHROPODS containing over 42,000 species. They include familiar arthropods such as lobsters (NEPHROPIDAE), crabs (BRACHYURA), shrimp (PENAEIDAE), and barnacles (THORACICA). (MSH) * class of chiefly aquatic arthropods; typically having the body covered with a hard shell or crust; includes lobsters, shrimp, crabs, barnacles, wood lice, etc. (CSP) 2007-08-03 2007-08-03 6657 C0010395 Crustacea Crustacea _6_2.2.1 crustaceans crustaceans http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_777 Eurypterygii 123366 2007-07-27 2007-07-27 C1089829 Eurypterygii Eurypterygii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Macaque * A genus of the subfamily CERCOPITHECINAE, family CERCOPITHECIDAE, consisting of 16 species inhabiting forests of Africa, Asia, and the islands of Borneo, Philippines, and Celebes. (MSH) * Any of several species of short-tailed monkeys of the genus Macacus. (NCI) * large genus of Old World monkeys (family Cercopithecidae) that includes the macaque and rhesus monkeys, and the Barbary apes; Macaca mulatta, the rhesus monkey, is used as a research animal. (CSP) 13183571 2006-10-05 2007-07-27 241651 9539 C0024398 Macaca Macaque _6_3.3.2.2.1 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 macaques This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Dicondylia 2007-08-03 2007-08-03 85512 C1037452 Dicondylia Dicondylia http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Diptera * A two-winged insect in the order Diptera. Typical used to refer to Drosophila melanogaster, the fruit fly; the subject of classical genetic studies, because of its rapid generation time and easily observed characteristics. (NCI) * An order of the class Insecta. Wings, when present, number two and distinguish Diptera from other so-called flies, while the halteres, or reduced hindwings, separate Diptera from other insects with one pair of wings. The order includes the families Calliphoridae, Oestridae, Phoridae, Sarcophagidae, Scatophagidae, Sciaridae, SIMULIIDAE, Tabanidae, Therevidae, Trypetidae, CERATOPOGONIDAE; CHIRONOMIDAE; CULICIDAE; DROSOPHILIDAE; GLOSSINIDAE; MUSCIDAE; TEPHRITIDAE; and PSYCHODIDAE. The larval form of Diptera species are called maggots (see LARVA). (MSH) * have one pair of membraneous wings, 3 segmented antennae, compound eye, sucking mouth parts, and 5 segmented tarsi; metamorphosis is complete; many larvae are parasitic; some species of adults are disease vectors. (CSP) 13141197 198563 2007-08-03 2007-08-03 7147 C0012578 Diptera Diptera _6_2.2.2.3 flies flies http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_781 Mormoopidae 13144011 2007-08-04 2007-08-04 241595 59445 C1271369 Mormoopidae Mormoopidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Malacostraca 13140940 2007-08-03 2007-08-03 218458 6681 C0392200 Malacostraca Malacostraca http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_779 Muscomorpha 2007-08-03 2007-08-03 43733 C1010974 Cyclorrhapha Muscomorpha Muscomorpha http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_783 Cavia * A common name used for the genus Cavia. The most common species is Cavia porcellus which is the domesticated guinea pig used for pets and biomedical research. (MSH) * Stout-bodied nearly tailless domesticated cavy; often kept as a pet and widely used in research. (CSP) 10140 13185258 2007-08-06 2007-08-06 356668 C0085979 Cavia Cavia guinea pigs guinea-pigs http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Ctenosquamata 123367 2007-07-27 2007-07-27 C1059402 Ctenosquamata Ctenosquamata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 DBA/2DeJ 000052 2007-08-15 2007-08-23 Beck, J.A., et al., Genealogies of mouse inbred strains (2000), Nature, Jan2000, v24, p23 DBA/2DeJ PMID: 10615122 Type: Inbred Strain Species: laboratory mouse H2 Haplotype: d Generation: F123 Appearance: dilute brown Related Genotype: a/a Tyrp1b/Tyrp1b Myo5ad/Myo5ad http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#JAX-mouse-stock http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting Passeroidea 175121 2007-07-27 2007-07-27 C1201267 Passeroidea Passeroidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Pan 13184941 2007-08-03 2007-08-03 345361 9596 C0085999 Pan Pan chimpanzees http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Long-tailed macaque 13853406 2006-10-07 2007-08-04 241652 9541 C0024399 Long-tailed macaque Macaca cynomolgus Macaca fascicularis Macaca irus crab eating macaque crab-eating macaque cynomolgus monkey cynomolgus monkeys http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 long-tailed macaque SJL 2006-10-05 2007-08-14 A strain of laboratory mouse. Inbr: F104 (J). Albino. Genet: c, p, rd. Origin: Swiss Webster outbred stock from three sources that were brought to The Jackson Laboratory between 1938 and 1943, and pen-bred until 1955, when sib-mating was started. Although the strain has been developed relatively recently, it has rapidly become widely used owing to the high incidence of reticulum cell sarcomas resembling Hodgkin's disease. General biological data on the strain have been reviewed by Crispens (1973). Carries the pink-eyed dilution gene, p, which is derived from Asian mice of the Mus musculus type (see also strains 129/J, P/J and FS/Ei) (Brilliant et al, 1994) Jax stock derived from the Lynch Rockefeller stock which were themselves derived from Pasteur Institute Swiss mice stock (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). PMID:10615122 PMID:4351481 PMID:8001787 SJL http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Rob_Williams http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/SJL.shtml Brachycera 2007-08-03 2007-08-03 7203 Brachycera Brachycera C0998489 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 Pteronotus 13186052 2007-08-04 2007-08-04 241599 59475 C1021554 Pteronotus Pteronotus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Eumalacostraca 2007-08-03 2007-08-03 72041 C0392200 Eumalacostraca Eumalacostraca http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#Subclass Pteronotus parnellii parnellii 14862240 2007-08-04 2007-08-04 544434 GBIF lists this as an unconfirmed name. Pteronotus parnellii parnellii Pteronotus parnellii parnellii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 mustached bat Guinea pig 10141 13804745 2007-08-06 2007-08-06 356672 C0999699 Cavia aperea porcellus Cavia cobaya Cavia cobya Cavia porcellus Guinea pig domestic guinea pig guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Acanthomorpha 123368 2007-07-27 2007-07-27 Acanthomorpha Acanthomorpha C1059403 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Schizophora 2007-08-03 2007-08-03 43738 C1010978 Schizophora Schizophora http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Chimpanzee 13803551 2007-08-03 2007-08-03 345363 9598 C0008111 Chimpanzee Pan troglodytes chimpanzee http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). C3H 2006-10-05 2007-08-14 C3H C3H mice have a genetic defect that leads to retinal degeneration and are blind from early adulthood (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). Derived from Strong's original stock which were themselves derived from the original Lathrop stock by way of Little's DBA stock (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan 2000, v24, p23). One of the first inbred strains developed in the early 20th century, derived from the first inbred strain DBA. DBA was developed by Little in 1909 - D ["dilute"], B ["brown"], A["non-agouti"]. (Staats, J. The laboratory mouse. in Biology of the Laboratory Mouse (ed. Green, E.L.) 1-9 (McGraw-Hill, New York, 1966)). PMID:10615122 Strain of inbred mouse. Inbr: F130 to F170 depending on substrain. Agouti. Developed by Strong 1920 from a cross of Bagg albino with DBA male (see CBA) with selection for a high incidence of mammary tumours. Now among the most widely used of all mouse strains. The sensitivity of BALB/c and C3H mice to mutagenesis by ethyl nitrosourea (ENU) has been valuable in mutagenesis programmes (Mouse mutagenesis consortium, http://www.mgu.har.mrc.ac.uk/mutabase/; German Human Genome Project, http://www.gsf.de/isg/groups/enu-mouse.html). (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI_defSource http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://www.informatics.jax.org/external/festing/mouse/docs/C3H.shtml Muridae 10066 13149097 2006-10-07 2007-08-03 241827 C0026802 Muridae Muridae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Parnell's mustached bat 13853207 2007-08-04 2007-08-04 241601 59475 C1021555 Parnell's mustached bat Pteronotus parnellii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 mustached bat Eucarida 2007-08-03 2007-08-03 6682 C0998215 Eucarida Eucarida http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_780 Noctilionidae 13144007 2007-08-04 2007-08-04 241592 94957 C0324772 Noctilionidae Noctilionidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Dunkin Hartley guinea pig 2007-08-06 2007-08-06 C0324524 Dunkin Hartley guinea pig Hartley guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_811 http://research.uiowa.edu/animal/?get=g_pig This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). English guinea pig 2007-08-06 2007-08-06 C0324529 English guinea pig English short-haired guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 http://research.uiowa.edu/animal/?get=g_pig This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Acalyptratae 2007-08-03 2007-08-03 43741 Acalyptratae Acalyptratae C1010980 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Gorilla 13184942 2007-08-03 2007-08-03 345359 9592 C1095850 Gorilla Gorilla http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Quail juvenile 2007-8-14 2007-8-14 Quail juvenile http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_253 FVB 2006-10-05 2007-08-05 BF_T0000260 FVB Inbred mouse strain. Inbr. F38. Albino,A,B,c,D,P. Origin: Outbred N:GP (NIH General Purpose) Swiss mice established at the National Institutes of Health in 1935. In 1966 two strains (HSFS/N and HSFR/N) were selected for sensitivity and resistance, respectively, to challenge with histamine following pertussis vaccination. In the early 1970s a group of mice at the eighth inbred generation of HSFS/N were found to carry the Fv1b allele for sensitivity to the B strain of Friend leukaemia virus. Homozygous mice were then inbred as strain FVB, without further selection for histamine sensitivity (Taketo et al 1991). Rowe (NIH) to Amsterdam, 1978. NIH stock that eventually passed to JAX - originally derived from the Lynch Rockefeller stock which were themselves derived from Pasteur Institute Swiss mice stock (Beck, J.A., et al., Geneology of mouse inbred strains (2000), Nature, Jan2000, v24, p23). PMID: 1848692 PMID:10615122 The large pronuclei of FVB mice are useful for gene transfer experiments involving direct DNA injection of the fertilized egg (Taketo, M. et al. FVB/N: an inbred mouse strain preferable for transgenic analyses.Proc. Natl Acad. Sci. USA 88, 2065-2069 (1991)). http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#MGI_defSource http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://www.informatics.jax.org/external/festing/mouse/docs/FVB.shtml Sciurognathi 2006-10-07 2006-10-07 33553 C1004570 Sciurognathi Sciurognathi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_782 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Noctilio 13186056 2007-08-04 2007-08-04 241593 94958 C1300204 Noctilio Noctilio http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Topeka guinea pig 2007-08-06 2007-08-06 Topeka guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Myotis 13185572 2007-08-04 2007-08-04 241529 9434 C0324749 Myotis Myotis http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Quail newborn 2007-8-14 2007-8-14 Quail newborn http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_253 Ephydroidea 2007-08-03 2007-08-03 43746 C1010985 Ephydroidea Ephydroidea http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Gorilla 13803552 2007-08-03 2007-08-03 345360 9593 C0018090 Gorilla Gorilla gorilla gorilla http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Quail adult 2007-8-14 2007-8-14 Quail adult http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_253 Wistar 2006-10-05 2006-10-05 A strain of albino rat developed at the Wistar Institute that has spread widely at other institutions. This has markedly diluted the original strain. Wistar Wistar http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#uncurated http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_20 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnOrganismTaxon_390 http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 true greater bulldog bat 13853211 2007-08-04 2007-08-04 241594 94963 C1043149 Noctilio leporinus greater bulldog bat greater bulldog bat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Mouse-eared Bat 13808441 2007-08-04 2007-08-04 51298 567105 C1015901 Mouse-eared Bat Mouse-eared Bat Myotis myotis http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Quail elderly 2007-8-14 2007-8-14 Quail elderly http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_253 Drosophilidae 13142932 2007-08-03 2007-08-03 222113 7214 C0178439 Drosophilidae Drosophilidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 pomace flies Absynninian guinea pig 2007-08-06 2007-08-06 Absynninian guinea pig C0324523 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 http://research.uiowa.edu/animal/?get=g_pig This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Natterers bat 109481 13808439 2007-08-04 2007-08-04 567107 C1051451 Myotis nattereri Natterer's bat Natterers bat http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Phyllonycteris 13191779 138701 1731787 2007-08-04 2007-08-04 C1066998 Phyllonycteris Phyllonycteris http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Pacifastacus 13179941 2007-08-03 2007-08-03 414807 6719 C0998237 Pacifastacus Pacifastacus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Macaque newborn 2007-8-14 2007-8-14 Macaque newborn http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_280 Tarsiidae 13149075 2007-08-20 2007-08-20 345133 9475 C0039320 Tarsiidae Tarsiidae The single family of PRIMATES in the infraorder TARSII, suborder HAPLORHINI. It is comprised of one genus, Tarsius, that inhabits southern Sumatra, Borneo, Sulawesi, and the Philippines. (MSH) http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 tarsiers This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Drosophilinae 2007-08-03 2007-08-03 43845 C1082675 Drosophilinae Drosophilinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 NIH multipurpose guinea pig 2007-08-06 2007-08-06 NIH multipurpose guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_793 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Gryllinae 114953 13148050 2007-08-03 2007-08-03 C1054662 Gryllinae Gryllinae field crickets house crickets http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 Protostomia 2007-08-03 2007-08-03 33317 C1004415 Protostomia Protostomia http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Phyllonycterinae 138700 2007-08-04 2007-08-04 C1066997 C1271374 Phyllonycterinae Phyllonycterinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 Cuban Flower Bat 13816028 2007-08-04 2007-08-04 270774 568683 C1669041 Cuban Flower Bat Phyllonycteris poeyi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Cyprinidae 13147168 2007-07-27 2007-07-27 62441 7953 C0010613 Cyprinidae Cyprinidae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 Tarsius 13191132 2007-08-20 2007-08-20 345134 9476 C1318105 Tarsius Tarsius http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 tarsier This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Drosophilini 2007-08-03 2007-08-03 46877 C1012908 Drosophilini Drosophilini http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_816 Macaque juvenile 2007-8-14 2007-8-14 Macaque juvenile http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_280 Strain 2 guinea pig 2007-08-06 2007-08-06 Strain 2 guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_798 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Annelida/Echiura/Pogonophora group 193545 2007-08-03 2007-08-03 Annelida/Echiura/Pogonophora group Annelida/Echiura/Pogonophora group C1215793 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Alouatta caraya 13815748 2007-08-02 2007-08-02 345176 9502 Alouatta caraya Alouatta caraya C0999507 black howler monkey http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Cyprinoidea 2007-07-27 2007-07-27 30727 C1003344 Cyprinoidea Cyprinoidea Cyprinoidei http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_785 Nyctalus 1008906 13186080 2007-08-04 2007-08-04 51299 C1271423 Nyctalus Nyctalus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Tarsius bancanus 13813692 2007-08-20 2007-08-20 345135 9477 C0999501 Horsfield's tarsier Tarsius bancanus Tarsius bancanus Western tarsier http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Rasborinae 2007-07-27 2007-07-27 39562 C1008284 Danioninae Rasborinae Rasborinae http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_787 Drosophilina 2007-08-03 2007-08-03 46879 C1012909 Drosophilina Drosophilina http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_817 Monkey * A non-taxonomic, non-specific term for the smaller longer-tailed PRIMATES. (MSH) * Any haplorhine primate not belonging to the family Tarsiidae, Hylobatidae, Pongidae, or Hominidae; this does not correspond to any taxon. This group is divided into Old World monkeys (Cercopithecidae) and New World monkeys (Callitrichidae and Cebidae). Many types are used as an experimental model for human disease and drug testing. (NCI) 2007-08-20 2007-08-20 C0026447 Monkey _6_3.3.2.2 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource Macaque adult 2007-8-14 2007-8-14 Macaque adult http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_280 Strain 13 guinea pig 2007-08-06 2007-08-06 Strain 13 guinea pig http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_798 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Loligo forbesi 13782288 2007-08-15 2007-08-15 61184 6618 C0998178 Loligo forbesi Loligo forbesi http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 northern European squid Aotidae 14869321 2007-08-02 2007-08-02 376918 Aotidae Aotidae This is currently listed as an unconfirmed Family taxon name in GBIF. The fact GBIF lists this Familys Genuses under Cebidae is reflected in this classes asserted disjoints. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_786 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Annelida * A phylum of metazoan invertebrates comprising the segmented worms, and including marine annelids (POLYCHAETA), freshwater annelids, earthworms (OLIGOCHAETA), and LEECHES. Only the leeches are of medical interest. (Dorland, 27th ed) (MSH) * phylum of metazoan invertebrates comprising the segmented worms, and including marine annelids (Polychaeta), freshwater annelids, earthworms (Oligochaeta), and Leeches. (CSP) 13140812 2007-08-03 2007-08-03 208765 6340 Annelida Annelida C0003096 C0322464 _6_2.1 annelid worms http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_776 segmented worms noctule 13808626 2007-08-04 2007-08-04 51300 567133 C1015903 Nyctalus noctula http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 noctule noctule Danio 13158199 2007-07-27 2007-07-27 7954 88132 Brachydanio C0998846 Danio Danio http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 Tarsius syrichta 13816102 2007-08-20 2007-08-20 345139 9478 C1095787 Philippine tarsier Tarsius syrichta Tarsius syrichta http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Macaque elderly 2007-8-14 2007-8-14 Macaque elderly http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#definition_incomplete http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_280 Northern clearwater crayfish 13792607 197198 2007-08-03 2007-08-03 414949 C1218308 Northern clearwater crayfish Northern clearwater crayfish Orconectes propinquus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Aotus trivirgatus 13792024 2007-08-20 2007-08-20 345195 9505 A species of the subfamily AOTINAE, family CEBIDAE, inhabiting the forested regions of Central and South America (from Panama to the Amazon). Vocalizations occur primarily at night when they are active, thus they are also known as Northern night monkeys. (MSH) Aotus trivirgatus Aotus trivirgatus As the Family listed in NCBI Tax (Aotidae) is currently listed as an unconfirmed Family taxon name in GBIF, GBIF lists this genus under the Cebidae family. C0003518 douroucouli http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 night monkey northern night monkey owl monkey This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Loligo opalescens 13782290 2007-08-15 2007-08-15 31211 61098 C1081666 Loligo opalescens Loligo opalescens http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 California spiny lobster 13831321 2007-08-03 2007-08-03 415122 6735 C0998248 California spiny lobster California spiny lobster Panulirus interruptus http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 Zebrafish * An exotic species of the family CYPRINIDAE, originally from Asia, that has been introduced in North America. They are used in embryological studies and to study the effects of certain chemicals on development. (MSH) * freshwater fish used in vertebrate genetic research and as a model for development. (CSP) 111475 13543182 2007-07-27 2007-07-27 7955 Brachydanio rerio C0043457 Cyprinus rerio Cyprinus rerio Hamilton, 1822 Danio rerio Danio rerio (Hamilton, 1822) Rerio Striped danio Zebra Zebrafish Zebrafish _6_3.2.1 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#UMLS_defSource http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 leopard danio zebra danio zebra fish zebrafish Clitellata 13140923 2007-08-03 2007-08-03 242474 42113 C1093346 Clitellata Clitellata http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_815 Aotus 13180261 2007-08-02 2007-08-02 345183 9504 Aotus Aotus As the Family listed in NCBI Tax (Aotidae) is currently listed as an unconfirmed Family taxon name in GBIF, GBIF lists this genus under the Cebidae family. C1265472 _6_3.3.2.2.4 http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#raw_import http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 night monkeys owl monkey This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). lesser mouse-eared bat 109482 13817144 2007-08-04 2007-08-04 568385 C1051452 Myotis blythii http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_791 lesser mouse-eared bat lesser mouse-eared bat Lepus 13184981 2007-08-20 2007-08-20 241664 9980 C0242372 Lepus Lepus hares http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Maryann_Martone http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting http://ontology.neuinfo.org/NIF/Backend/OBO_annotation_properties.owl#NCBI_Taxonomy http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl#birnlex_788 This class is not intended to present a normative, comprehensive, taxonomic hierarchy, but rather is provided as an approximate indication of the phylogenetic relatedness amongst the taxonomic groups nested under it (BB). Mutation Type 2007-08-16 2007-08-16 As with the more specific types of isogenic status listed as TaxonRank instances, there is an implied subsumptive graph amongst the entries in this list that can be represented as a hierarchy when the final representation technique is resolved for this information. For example, Transgenic_insertion is a type of Insertion, Knock-out_targeted_mutatation is a type of birnlex_730, etc. Mutation Type The mutation type instances are a modified version of the collection of mutation types employed by the IMSR. The primary difference is additional, distinct types have been specified, when an IMSR definition included multiple types in its definition. http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#Bill_Bug http://ontology.neuinfo.org/NIF/Backend/BIRNLex_annotation_properties.owl#pending_final_vetting