@prefix : .
@prefix BFO: .
@prefix BIRNLEX: .
@prefix dc: .
@prefix NIFEXT: .
@prefix NIFRID: .
@prefix NLX: .
@prefix NLXQUAL: .
@prefix owl: .
@prefix PATO: .
@prefix rdf: .
@prefix rdfs: .
@prefix SAO: .
@prefix skos: .
@prefix xml: .
@prefix xsd: .
a owl:Ontology ;
owl:imports ,
;
dc:title "NIF-Quality: contains odds and ends from SAO-CORE and NIF-Cell"^^xsd:string .
### Classes
NIFEXT:1 a owl:Class ;
rdfs:label "Horizontal"^^xsd:string ;
skos:prefLabel "Horizontal"^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
NIFRID:createdDate "2007-09-05"^^xsd:string ;
NIFRID:modifiedDate "2007-09-05"^^xsd:string .
NIFEXT:2 a owl:Class ;
rdfs:label "Bipolar"^^xsd:string ;
skos:prefLabel "Bipolar"^^xsd:string ;
rdfs:subClassOf SAO:1278200674 ;
NIFRID:createdDate "2007-09-05"^^xsd:string ;
NIFRID:modifiedDate "2007-09-05"^^xsd:string .
NIFEXT:3 a owl:Class ;
rdfs:label "Basket"^^xsd:string ;
skos:prefLabel "Basket"^^xsd:string ;
rdfs:subClassOf SAO:1278200674 ;
NIFRID:createdDate "2007-09-05"^^xsd:string ;
NIFRID:modifiedDate "2007-09-05"^^xsd:string .
NIFEXT:4 a owl:Class ;
rdfs:label "Chandelier"^^xsd:string ;
skos:prefLabel "Chandelier"^^xsd:string ;
rdfs:subClassOf SAO:1278200674 ;
NIFRID:createdDate "2007-09-05"^^xsd:string ;
NIFRID:modifiedDate "2007-09-05"^^xsd:string .
NLX:66639 a owl:Class ;
rdfs:label "Co-staining"^^xsd:string ;
rdfs:subClassOf BIRNLEX:2107 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:090901 a owl:Class ;
rdfs:label "Oxidized molecular quality"^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
NIFRID:createdDate "August 31, 2009"^^xsd:string ;
dc:contributor "Jane Bugea"^^xsd:string .
NLXQUAL:100810 a owl:Class ;
rdfs:label "Differential expression"^^xsd:string ;
skos:definition "Expression that is increased or decreased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010003 ;
owl:versionInfo "135486"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100811 a owl:Class ;
rdfs:label "Increased expression"^^xsd:string ;
NIFRID:synonym "Up-regulated"^^xsd:string,
"Up-regulated expression"^^xsd:string,
"Upregulated"^^xsd:string,
"Upregulated expression"^^xsd:string ;
skos:definition "Expression that is increased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf NLXQUAL:100810 ;
owl:versionInfo "135147"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100812 a owl:Class ;
rdfs:label "Decreased expression"^^xsd:string ;
NIFRID:synonym "Down regulated"^^xsd:string,
"Down regulated expression"^^xsd:string,
"Down-regulated"^^xsd:string,
"Down-regulated expression"^^xsd:string ;
skos:definition "Expression that is decreased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf NLXQUAL:100810 ;
owl:versionInfo "135481"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100813 a owl:Class ;
rdfs:label "No change in expression"^^xsd:string ;
NIFRID:synonym "No change"^^xsd:string ;
skos:definition "Expression that has not reached a significance level of p=0.05 relative to a control group."^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010003 ;
owl:versionInfo "135746"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100814 a owl:Class ;
rdfs:label "Increased staining"^^xsd:string ;
skos:definition "Staining that is increased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf NLXQUAL:100816 ;
owl:versionInfo "135497"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100815 a owl:Class ;
rdfs:label "Decreased staining"^^xsd:string ;
skos:definition "Staining that is decreased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf NLXQUAL:100816 ;
owl:versionInfo "135484"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100816 a owl:Class ;
rdfs:label "Differential staining"^^xsd:string ;
skos:definition "Staining that is increased or decreased relative to a control group at a significance level of p=0.05."^^xsd:string ;
rdfs:subClassOf BIRNLEX:2107 ;
owl:versionInfo "135489"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:100817 a owl:Class ;
rdfs:label "No change in staining"^^xsd:string ;
skos:definition "Staining that has not reached a significance level of p=0.05 relative to a control group."^^xsd:string ;
rdfs:subClassOf BIRNLEX:2107 ;
owl:versionInfo "135501"^^xsd:string ;
NIFRID:createdDate "November 1, 2010"^^xsd:string .
NLXQUAL:1010001 a owl:Class ;
rdfs:label "Decreased co-staining"^^xsd:string ;
rdfs:subClassOf NLX:66639 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010002 a owl:Class ;
rdfs:label "Increased co-staining"^^xsd:string ;
rdfs:subClassOf NLX:66639 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010003 a owl:Class ;
rdfs:label "Expression level"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
owl:versionInfo "135747"^^xsd:string ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010004 a owl:Class ;
rdfs:label "Co-expression"^^xsd:string ;
skos:definition "Expression level indicated that two or more signals are expressed together in the same structure"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010003 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010005 a owl:Class ;
rdfs:label "Decreased co-expression"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010004 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010006 a owl:Class ;
rdfs:label "Increased co-expression"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010004 ;
NIFRID:createdDate "October 29, 2010"^^xsd:string .
NLXQUAL:1010007 a owl:Class ;
rdfs:label "Staining density"^^xsd:string ;
rdfs:subClassOf BIRNLEX:2107 ;
NIFRID:createdDate "November 1, 2010"^^xsd:string .
NLXQUAL:1010008 a owl:Class ;
rdfs:label "Heavy staining density"^^xsd:string ;
NIFRID:synonym "Heavily dense staining"^^xsd:string,
"Heavy staining"^^xsd:string,
"Intense staining"^^xsd:string,
"Strong staining"^^xsd:string,
"Very dense staining"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010007 ;
NIFRID:createdDate "November 11, 2010"^^xsd:string .
NLXQUAL:1010009 a owl:Class ;
rdfs:label "Moderate staining density"^^xsd:string ;
NIFRID:synonym "Intermediate staining"^^xsd:string,
"Moderate staining"^^xsd:string,
"Moderately dense staining"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010007 ;
NIFRID:createdDate "November 1, 2010"^^xsd:string .
NLXQUAL:1010010 a owl:Class ;
rdfs:label "No staining"^^xsd:string ;
NIFRID:synonym "Absent staining"^^xsd:string,
"Negative staining"^^xsd:string,
"Not detectable staining"^^xsd:string,
"Undetectable staining"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010007 ;
NIFRID:createdDate "November 1, 2010"^^xsd:string .
NLXQUAL:1010011 a owl:Class ;
rdfs:label "Weak staining density"^^xsd:string ;
NIFRID:synonym "Diffuse staining"^^xsd:string,
"Low staining"^^xsd:string,
"Minimally dense staining"^^xsd:string,
"Scattered staining"^^xsd:string,
"Weak staining"^^xsd:string ;
rdfs:subClassOf NLXQUAL:1010007 ;
NIFRID:createdDate "November 1, 2010"^^xsd:string .
NLXQUAL:20090101 a owl:Class ;
rdfs:label "Electron-dense"^^xsd:string ;
skos:prefLabel "Electron-dense"^^xsd:string ;
skos:definition "The quality of being relatively impermeable to the electron beam of an electron microscope"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string .
NLXQUAL:20090301 a owl:Class ;
rdfs:label "Demyelinated"^^xsd:string ;
skos:prefLabel "Demyelinated"^^xsd:string ;
skos:definition "Loss of myelin sheath from a normally myelinated axon or dendrite"^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
NIFRID:createdDate "March 2, 2009"^^xsd:string .
NLXQUAL:20090302 a owl:Class ;
rdfs:label "Mutated"^^xsd:string ;
skos:prefLabel "Mutated"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
NIFRID:createdDate "March 2, 2009"^^xsd:string .
NLXQUAL:20090303 a owl:Class ;
rdfs:label "Fragmented"^^xsd:string ;
skos:prefLabel "Fragmented"^^xsd:string ;
skos:definition "Broken into pieces"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
owl:versionInfo "130025"^^xsd:string ;
NIFRID:createdDate "March 2, 2009"^^xsd:string ;
NIFRID:modifiedDate "October 22, 2010"^^xsd:string .
NLXQUAL:20090501 a owl:Class ;
rdfs:label "Excitatory post synaptic potential"^^xsd:string ;
NIFRID:synonym "Excitatory post-synaptic potential"^^xsd:string,
"Excitatory postsynaptic potential"^^xsd:string ;
NIFRID:abbrev "EPSP"^^xsd:string ;
skos:definition "A temporay change in postsynaptic potential, usually a depolarization, which increases the likelihood of action potential discharge. This is usually due to the flow of positively charged ions into the postsynaptic cell, but can also be due to a reduction in negatively charged ionic current or the turning off of a potassium current. In common usage, the EPSP typically refers to an evoked EPSP."^^xsd:string ;
rdfs:subClassOf PATO:0001462 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090502 a owl:Class ;
rdfs:label "Inhibitory postsynaptic potential"^^xsd:string ;
NIFRID:synonym "Inhibitory post synaptic potential"^^xsd:string,
"Inhibitory post-synaptic potential"^^xsd:string,
"IPSP"^^xsd:string ;
skos:definition "A synaptic potential which reduces the likelihood of an action potential. Typically this is a temporay increase in postsynaptic potential, or hyperpolarization, but depolarizing or nonpolarizing potentials can also be considered inhibitory if they reduce the likelihood of action potential firing. Hyperpolarization can be the result of several ionic flows including an increase of negative charged ions into the cell, or a decrease of positively charged ions into the cell. In normal cells a Chloride conductance is the negative charge carrier and its activation is an inhibitory postsynaptic potential."^^xsd:string ;
rdfs:subClassOf PATO:0001462 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090503 a owl:Class ;
rdfs:label "Resting Membrane potential"^^xsd:string ;
skos:definition "A quality inhering in a cell's plasma membrane by virtue of the electric potential difference across it during the resting state of the cell. This resting state usually implies that the potassium current dominates membrane potential."^^xsd:string ;
rdfs:subClassOf PATO:0001462 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090504 a owl:Class ;
rdfs:label "Evoked Excitatory post synaptic potential"^^xsd:string ;
NIFRID:synonym "Evoked EPSP"^^xsd:string ;
skos:definition "An EPSP that was evoked by an action potential invading a presynaptic axon. This is as opposed to a spontaneous EPSP."^^xsd:string ;
rdfs:subClassOf NLXQUAL:20090501 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090505 a owl:Class ;
rdfs:label "Spontaneous Excitatory post synaptic potential"^^xsd:string ;
NIFRID:synonym "mEPSP"^^xsd:string,
"mini"^^xsd:string,
"miniature EPSP"^^xsd:string ;
skos:definition "An EPSP that is elicited by the random fusion of a synaptic vesicle, in contrast to an evoked EPSP."^^xsd:string ;
rdfs:subClassOf NLXQUAL:20090501 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:acronym "sEPSP"^^xsd:string .
NLXQUAL:20090506 a owl:Class ;
rdfs:label "Evoked inhibitory postsynaptic potential"^^xsd:string ;
NIFRID:synonym "Evoked inhibitory post synaptic potential"^^xsd:string,
"Evoked inhibitory post-synaptic potential"^^xsd:string,
"evoked IPSP"^^xsd:string ;
skos:definition "An IPSP that is the result of an action potential invading a presynaptic inhibitory axon, as opposed to a spontaneous IPSP"^^xsd:string ;
rdfs:subClassOf NLXQUAL:20090502 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090507 a owl:Class ;
rdfs:label "Spontaneous Inhibitory postsynaptic potential"^^xsd:string ;
NIFRID:synonym "mini IPSP"^^xsd:string,
"miniature IPSP"^^xsd:string,
"mIPSP"^^xsd:string,
"sIPSP"^^xsd:string,
"Spontaneous inhibitory post synaptic potential"^^xsd:string,
"Spontaneous inhibitory post-synaptic potential"^^xsd:string ;
skos:definition "An IPSP that is the result of a spontaneous fusion of a vessicle, as opposed to an evoked IPSP"^^xsd:string ;
rdfs:subClassOf NLXQUAL:20090502 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXQUAL:20090508 a owl:Class ;
rdfs:label "Event related potential"^^xsd:string ;
NIFRID:synonym "ERPs"^^xsd:string ;
NIFRID:abbrev "ERP"^^xsd:string ;
rdfs:subClassOf PATO:0001464 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
NIFRID:modifiedDate "May 3, 2010"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
SAO:3169628 a owl:Class ;
rdfs:label "Stacked"^^xsd:string ;
skos:prefLabel "Stacked"^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:497641585,
SAO:548826380 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao3169628"^^xsd:string .
SAO:18717211 a owl:Class ;
rdfs:label "Configuration"^^xsd:string ;
skos:prefLabel "Configuration"^^xsd:string ;
rdfs:subClassOf SAO:732945962 ;
owl:disjointWith SAO:271899308 ;
rdfs:comment "Refers to a specialized arrangements of a cellular component or other structure that is characteristic of a given region, e.g., bundled microtubules."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao18717211"^^xsd:string .
SAO:47950958 a owl:Class ;
rdfs:label "Smooth"^^xsd:string ;
skos:prefLabel "Smooth"^^xsd:string ;
skos:definition "Nucleus with smooth membrane and no large folds or lobules."^^xsd:string ;
rdfs:subClassOf SAO:343486489 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao47950958"^^xsd:string .
SAO:74391158 a owl:Class ;
rdfs:label "Pathological"^^xsd:string ;
skos:prefLabel "Pathological"^^xsd:string ;
skos:definition "Cellular inclusions associated with pathological conditions."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao74391158"^^xsd:string .
SAO:107236050 a owl:Class ;
rdfs:label "Microtubule Polarity"^^xsd:string ;
skos:prefLabel "Microtubule Polarity"^^xsd:string ;
skos:definition "Microtubules are characterized by a + and a - end and may be oriented with respect to the soma (origin) in either + to - or - to +."^^xsd:string ;
rdfs:subClassOf SAO:349337269 ;
owl:disjointWith SAO:311075036 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao107236050"^^xsd:string .
SAO:124571525 a owl:Class ;
rdfs:label "Half Life"^^xsd:string ;
skos:prefLabel "Half Life"^^xsd:string ;
skos:definition "Measure of turnover."^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:136816674,
SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:1510923311,
SAO:1779606731,
SAO:1788621392,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao124571525"^^xsd:string .
SAO:128105491 a owl:Class ;
rdfs:label "Fused Vesicle"^^xsd:string ;
skos:prefLabel "Fused Vesicle"^^xsd:string ;
NIFRID:synonym "Omega profile"^^xsd:string ;
skos:definition "Synaptic vesicle that is fused to the pre-synaptic membrane, forming the characteristic omega profile."^^xsd:string ;
rdfs:subClassOf SAO:1863391630 ;
owl:disjointWith SAO:854959971,
SAO:967304317,
SAO:1785495506 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao128105491"^^xsd:string .
SAO:128827344 a owl:Class ;
rdfs:label "Aspiny Dendrite Quality"^^xsd:string ;
skos:prefLabel "Aspiny"^^xsd:string ;
NIFRID:synonym "Aspiny"^^xsd:string ;
skos:definition "A dendrite characterized by few or no recognizable dendritic spines."^^xsd:string ;
rdfs:subClassOf SAO:1959705051 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao128827344"^^xsd:string .
SAO:136816674 a owl:Class ;
rdfs:label "Cross Section Diameter Minor"^^xsd:string ;
skos:prefLabel "Cross Section Diameter Minor"^^xsd:string ;
skos:definition "Minimum diameter of a cross section through structure."^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:1510923311,
SAO:1779606731,
SAO:1788621392,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao136816674"^^xsd:string .
SAO:196989303 a owl:Class ;
rdfs:label "Volume"^^xsd:string ;
skos:prefLabel "Volume"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao196989303"^^xsd:string .
SAO:223845603 a owl:Class ;
rdfs:label "Synaptic Connectivity"^^xsd:string ;
skos:prefLabel "Synaptic Connectivity"^^xsd:string ;
skos:definition "Implies that a morphologically identified synapse exists between two cell components where release of transmitter from cell influences cell B."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao223845603"^^xsd:string .
SAO:268063700 a owl:Class ;
rdfs:label "Branched Spine"^^xsd:string ;
skos:prefLabel "Branched Spine"^^xsd:string ;
skos:definition "Characterized by two or more heads (Harris et. al 1992) that emerge from the same origin (Sorra KE and Harris KM, 2000)."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
owl:disjointWith SAO:614188547,
SAO:941226261 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao268063700"^^xsd:string .
SAO:271899308 a owl:Class ;
rdfs:label "Orientation"^^xsd:string ;
skos:prefLabel "Orientation"^^xsd:string ;
skos:definition "Refers to the \"entities of reference\" (FMA). Location may be defined by qualitative coodrinates or absolute coordinates."^^xsd:string ;
rdfs:subClassOf SAO:732945962 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao271899308"^^xsd:string .
SAO:279801585 a owl:Class ;
rdfs:label "Measurement"^^xsd:string ;
skos:prefLabel "Measurement"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
owl:disjointWith SAO:349337269,
SAO:732945962 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao279801585"^^xsd:string .
SAO:282380853 a owl:Class ;
rdfs:label "Basal"^^xsd:string ;
skos:prefLabel "Basal"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-282380853"^^xsd:string .
SAO:296309608 a owl:Class ;
rdfs:label "Bundled"^^xsd:string ;
skos:prefLabel "Bundled"^^xsd:string ;
skos:definition "When several members of a class occur tightly apposed to one another or attached to one another in identifiable bundles."^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:3169628,
SAO:497641585,
SAO:548826380 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao296309608"^^xsd:string .
SAO:301169922 a owl:Class ;
rdfs:label "Lobulated"^^xsd:string ;
skos:prefLabel "Lobulated"^^xsd:string ;
skos:definition "Nucleus with heavily indented nuclear membrane, giving the appearance of one or more lobes."^^xsd:string ;
rdfs:subClassOf SAO:343486489 ;
owl:disjointWith SAO:47950958 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao301169922"^^xsd:string .
SAO:311075036 a owl:Class ;
rdfs:label "Cell Body Referent Polarity"^^xsd:string ;
skos:prefLabel "Cell Body Referent Polarity"^^xsd:string ;
rdfs:subClassOf SAO:349337269 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao311075036"^^xsd:string .
SAO:336034368 a owl:Class ;
rdfs:label "Population Quality"^^xsd:string ;
skos:prefLabel "Population Quality"^^xsd:string ;
skos:definition "Descriptive terms pertaining to a population of objects."^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao336034368"^^xsd:string .
SAO:343486489 a owl:Class ;
rdfs:label "Nucleus Quality"^^xsd:string ;
skos:prefLabel "Nucleus Quality"^^xsd:string ;
skos:definition "The shape of the nucleus, e.g., round, lobulated, indented"^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao343486489"^^xsd:string .
SAO:349337269 a owl:Class ;
rdfs:label "Polarity"^^xsd:string ;
skos:prefLabel "Polarity"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
owl:disjointWith SAO:732945962 ;
rdfs:comment "Need to define property with \"reference point\""^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao349337269"^^xsd:string .
SAO:358853874 a owl:Class ;
rdfs:label "Orthodox"^^xsd:string ;
skos:prefLabel "Orthodox"^^xsd:string ;
skos:definition "Morphological state characterized by an expanded matrix space and contracted intracristal space; observed experimentally when ADP is added (Mannella et al., 2001)."^^xsd:string ;
rdfs:subClassOf SAO:1562245920 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao358853874"^^xsd:string .
SAO:430240391 a owl:Class ;
rdfs:label "Longitudinal"^^xsd:string ;
skos:prefLabel "Longitudinal"^^xsd:string ;
skos:definition "Oriented parallel to the long axis."^^xsd:string ;
rdfs:subClassOf SAO:271899308 ;
owl:disjointWith SAO:679027665 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao430240391"^^xsd:string .
SAO:497641585 a owl:Class ;
rdfs:label "Branched"^^xsd:string ;
skos:prefLabel "Branched"^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:548826380 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao497641585"^^xsd:string .
SAO:542191739 a owl:Class ;
rdfs:label "Adjacency"^^xsd:string ;
skos:prefLabel "Adjacency"^^xsd:string ;
skos:definition "Two entities are considered to be adjacent if they have no overlapping (shared) boundaries and parts and not other anatomical entity is interposed between them. The adjacency relationship is symmetrical (adapted from FMA)."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao542191739"^^xsd:string ;
NIFRID:umls_ID "C0923871"^^xsd:string .
SAO:542875575 a owl:Class ;
rdfs:label "Fusiform"^^xsd:string ;
skos:prefLabel "Fusiform"^^xsd:string ;
NIFRID:synonym "Spindle"^^xsd:string ;
skos:definition "Elongated shape that tapers at both ends"^^xsd:string ;
rdfs:subClassOf SAO:1126011106 ;
owl:disjointWith SAO:957949983 ;
NIFRID:hasCurationStatus NIFRID:curation_complete ;
NIFRID:sao_ID "sao542875575"^^xsd:string .
SAO:548826380 a owl:Class ;
rdfs:label "Single"^^xsd:string ;
skos:prefLabel "Single"^^xsd:string ;
skos:definition "Indicates that the feature exists in isolation, e.g., single filaments as opposed to bundled filaments."^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao548826380"^^xsd:string .
SAO:614188547 a owl:Class ;
rdfs:label "Simple"^^xsd:string ;
skos:prefLabel "Simple"^^xsd:string ;
skos:definition "Fingerlike evaginations that extend from the dendrite that are filled with fluffy filamentous material, characteristic of some neurons like motor neurons (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
owl:disjointWith SAO:941226261 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao614188547"^^xsd:string .
SAO:632949619 a owl:Class ;
rdfs:label "Radius"^^xsd:string ;
skos:prefLabel "Radius"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:824839913,
SAO:888175480 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao632949619"^^xsd:string .
SAO:638749545 a owl:Class ;
rdfs:label "Spiny Dendrite Quality"^^xsd:string ;
skos:prefLabel "Spiny"^^xsd:string ;
NIFRID:synonym "Spiny"^^xsd:string ;
skos:definition "Characterized by a high density of dendritic spines."^^xsd:string ;
rdfs:subClassOf SAO:1959705051 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao638749545"^^xsd:string .
SAO:656094176 a owl:Class ;
rdfs:label "Actin Based Motility"^^xsd:string ;
skos:prefLabel "Actin Based Motility"^^xsd:string ;
skos:definition "Mobility that is mediated by the actin cytoskeleton."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao656094176"^^xsd:string .
SAO:675186109 a owl:Class ;
rdfs:label "Minus To Plus"^^xsd:string ;
skos:prefLabel "Minus To Plus"^^xsd:string ;
rdfs:subClassOf SAO:107236050 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao675186109"^^xsd:string .
SAO:679027665 a owl:Class ;
rdfs:label "Transverse"^^xsd:string ;
skos:prefLabel "Transverse"^^xsd:string ;
skos:definition "Oriented orthogonal to the long axis."^^xsd:string ;
rdfs:subClassOf SAO:271899308 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao679027665"^^xsd:string .
SAO:723896903 a owl:Class ;
rdfs:label "Spatial Relationship"^^xsd:string ;
skos:prefLabel "Spatial Relationship"^^xsd:string ;
skos:definition "These relationships are modeled after the spatial relationships contained in the FMA."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao723896903"^^xsd:string .
SAO:732945962 a owl:Class ;
rdfs:label "Anatomical Pattern"^^xsd:string ;
skos:prefLabel "Anatomical Pattern"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao732945962"^^xsd:string .
SAO:754373097 a owl:Class ;
rdfs:label "Tufted Dendrite Quality"^^xsd:string ;
skos:prefLabel "Tufted"^^xsd:string ;
NIFRID:synonym "Tufted"^^xsd:string ;
skos:definition "Characterized by a terminal tuft."^^xsd:string ;
rdfs:subClassOf SAO:1959705051 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao754373097"^^xsd:string .
SAO:783483540 a owl:Class ;
rdfs:label "Distal End"^^xsd:string ;
skos:prefLabel "Distal End"^^xsd:string ;
skos:definition "Ending of a process furthest from the cell soma."^^xsd:string ;
rdfs:subClassOf SAO:311075036 ;
owl:disjointWith SAO:812067870 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao783483540"^^xsd:string .
SAO:809320003 a owl:Class ;
rdfs:label "En Passant"^^xsd:string ;
skos:prefLabel "En Passant"^^xsd:string ;
rdfs:subClassOf SAO:1189513296 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao809320003"^^xsd:string ;
skos:example .
SAO:812067870 a owl:Class ;
rdfs:label "Proximal End"^^xsd:string ;
skos:prefLabel "Proximal End"^^xsd:string ;
skos:definition "Ending of a process closest to the cell soma."^^xsd:string ;
rdfs:subClassOf SAO:311075036 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao812067870"^^xsd:string .
SAO:819188787 a owl:Class ;
rdfs:label "Acute Slice"^^xsd:string ;
skos:prefLabel "Acute Slice"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao819188787"^^xsd:string .
SAO:824839913 a owl:Class ;
rdfs:label "Cross Section Diameter Major"^^xsd:string ;
skos:prefLabel "Cross Section Diameter Major"^^xsd:string ;
skos:definition "Maximum diameter of a cross section through structure, assumed to be the maximum diameter in the case of spherical structures like vesicles. Use this field when entering only a single cross section value where the structure is assumed to be spherical."^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:888175480 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao824839913"^^xsd:string .
SAO:854959971 a owl:Class ;
rdfs:label "Pleomorphic"^^xsd:string ;
skos:prefLabel "Pleomorphic"^^xsd:string ;
skos:definition "Characterized by many shapes in glutaraldehyde fixed tissue."^^xsd:string ;
rdfs:subClassOf SAO:1863391630 ;
owl:disjointWith SAO:967304317 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao854959971"^^xsd:string .
SAO:888175480 a owl:Class ;
rdfs:label "Width"^^xsd:string ;
skos:prefLabel "Width"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao888175480"^^xsd:string .
SAO:897115057 a owl:Class ;
rdfs:label "In Vivo"^^xsd:string ;
skos:prefLabel "In Vivo"^^xsd:string ;
skos:definition "Indicates that a feature was described in intact tissue."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao897115057"^^xsd:string .
SAO:941226261 a owl:Class ;
rdfs:label "Sessile"^^xsd:string ;
skos:prefLabel "Sessile"^^xsd:string ;
skos:definition "Also refers to a stubby spine."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao941226261"^^xsd:string .
SAO:943768255 a owl:Class ;
rdfs:label "NIF-Quality Retired class"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
rdfs:comment "Retired classes from NIF-Quality"^^xsd:string .
SAO:957949983 a owl:Class ;
rdfs:label "Spherical"^^xsd:string ;
skos:prefLabel "Spherical"^^xsd:string ;
skos:definition "Generally round shape where minimum diameter and maximum diameter are roughly the same"^^xsd:string ;
rdfs:subClassOf SAO:1126011106 ;
NIFRID:hasCurationStatus NIFRID:curation_complete ;
NIFRID:sao_ID "sao957949983"^^xsd:string .
SAO:967304317 a owl:Class ;
rdfs:label "Round Clear"^^xsd:string ;
skos:prefLabel "Round Clear"^^xsd:string ;
rdfs:subClassOf SAO:1863391630 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao967304317"^^xsd:string .
SAO:969067581 a owl:Class ;
rdfs:label "Continuity"^^xsd:string ;
skos:prefLabel "Continuity"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao969067581"^^xsd:string ;
NIFRID:umls_ID "C0934150"^^xsd:string .
SAO:1057800815 a owl:Class ;
rdfs:label "Morphological Quality"^^xsd:string ;
skos:prefLabel "Morphological Quality"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
owl:disjointWith SAO:279801585,
SAO:349337269,
SAO:732945962 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1057800815"^^xsd:string .
SAO:1062287912 a owl:Class ;
rdfs:label "Axocruciform"^^xsd:string ;
skos:prefLabel "Axocruciform"^^xsd:string ;
skos:definition "Synaptic arrangement where the axon courses orthogonal to and forms a synapse with a portion of dendrite."^^xsd:string ;
rdfs:subClassOf SAO:1289583168 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1062287912"^^xsd:string .
SAO:1126011106 a owl:Class ;
rdfs:label "Soma Quality"^^xsd:string ;
skos:prefLabel "Soma Quality"^^xsd:string ;
skos:definition "Shape descriptors that have been applied to the cell soma of nerve cells. The shape generally does not take into account processes extending from the soma."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1189513296,
SAO:1436578787,
SAO:1562245920,
SAO:1746643703,
SAO:1843037539,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:sao_ID "sao-1126011106"^^xsd:string .
SAO:1141340175 a owl:Class ;
rdfs:label "Filopodial"^^xsd:string ;
skos:prefLabel "Filopodial"^^xsd:string ;
skos:definition "Dendritic specialization that is typically long and has a darker cytoplasm than spines. Additionally, filopodia usually end in a pointy rather than a bulbous head, and can be much longer than mature dendritic spines."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
owl:disjointWith SAO:268063700,
SAO:614188547,
SAO:941226261,
SAO:1643644091,
SAO:1786354232,
SAO:1983595164,
SAO:2045795635 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1141340175"^^xsd:string .
SAO:1143221302 a owl:Class ;
rdfs:label "Random"^^xsd:string ;
skos:prefLabel "Random"^^xsd:string ;
skos:definition "No particular orientation."^^xsd:string ;
rdfs:subClassOf SAO:271899308 ;
owl:disjointWith SAO:430240391,
SAO:679027665,
SAO:2077793822 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1143221302"^^xsd:string .
SAO:1152497626 a owl:Class ;
rdfs:label "Condensed"^^xsd:string ;
skos:prefLabel "Condensed"^^xsd:string ;
skos:definition "Morphological state characterized by a contracted matrix and expanded intracristal space; observed experimentally when added ADP is used up (Mannella et al., 2001)."^^xsd:string ;
rdfs:subClassOf SAO:1562245920 ;
owl:disjointWith SAO:358853874 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1152497626"^^xsd:string .
SAO:1179195262 a owl:Class ;
rdfs:label "Attachment"^^xsd:string ;
skos:prefLabel "Attachment"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1179195262"^^xsd:string ;
NIFRID:umls_ID "C0923872"^^xsd:string .
SAO:1189513296 a owl:Class ;
rdfs:label "Bouton Quality"^^xsd:string ;
skos:prefLabel "Bouton Quality"^^xsd:string ;
skos:definition "Refers to the morphology of a bouton."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1436578787,
SAO:1562245920,
SAO:1746643703,
SAO:1843037539,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1189513296"^^xsd:string .
SAO:1211239798 a owl:Class ;
rdfs:label "Connectivity"^^xsd:string ;
skos:prefLabel "Connectivity"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1211239798"^^xsd:string ;
NIFRID:umls_ID "C0925206"^^xsd:string .
SAO:1217691568 a owl:Class ;
rdfs:label "Length"^^xsd:string ;
skos:prefLabel "Length"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:124571525,
SAO:136816674,
SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:1510923311,
SAO:1779606731,
SAO:1788621392,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1217691568"^^xsd:string .
SAO:1277586470 a owl:Class ;
rdfs:label "Indented"^^xsd:string ;
skos:prefLabel "Indented"^^xsd:string ;
skos:definition "Nucleus with one or more indentations in the nuclear membrane."^^xsd:string ;
rdfs:subClassOf SAO:343486489 ;
owl:disjointWith SAO:47950958,
SAO:301169922 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1277586470"^^xsd:string .
SAO:1278200674 a owl:Class ;
rdfs:label "Cell Morphological Quality"^^xsd:string ;
skos:prefLabel "Cell Morphological Quality"^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
NIFRID:sao_ID "sao1278200674"^^xsd:string .
SAO:1288413465 a owl:Class ;
rdfs:label "Sparsely Spiny Dendrite Quality"^^xsd:string ;
skos:prefLabel "Sparsely Spiny"^^xsd:string ;
NIFRID:synonym "Sparsely Spiny"^^xsd:string ;
skos:definition "Characterized by a low density of dendritic spines."^^xsd:string ;
rdfs:subClassOf SAO:1959705051 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1288413465"^^xsd:string .
SAO:1289583168 a owl:Class ;
rdfs:label "Synaptic Configuration"^^xsd:string ;
skos:prefLabel "Synaptic Configuration"^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:3169628,
SAO:296309608,
SAO:497641585,
SAO:548826380,
SAO:1475145503,
SAO:2082026326 ;
rdfs:comment "Arrangement of pre- and post-synaptic components."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1289583168"^^xsd:string .
SAO:1301290450 a owl:Class ;
rdfs:label "Microtubule Mediated Motility"^^xsd:string ;
skos:prefLabel "Microtubule Mediated Motility"^^xsd:string ;
skos:definition "Refers to the transport of a structure via microtubules and microtubule-associated motors."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1301290450"^^xsd:string .
SAO:1330317521 a owl:Class ;
rdfs:label "Motility"^^xsd:string ;
skos:prefLabel "Motility"^^xsd:string ;
skos:definition "Refers to the ability of structures to move about the cell."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1330317521"^^xsd:string .
SAO:1374293695 a owl:Class ;
rdfs:label "Junctional Continuity"^^xsd:string ;
skos:prefLabel "Junctional Continuity"^^xsd:string ;
skos:definition "Indicates that two entities share a continuous space but that the continuity is formed through a specialized junctional component, e.g., gap junction."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1374293695"^^xsd:string .
SAO:1436578787 a owl:Class ;
rdfs:label "Spine Quality"^^xsd:string ;
skos:prefLabel "Spine Quality"^^xsd:string ;
skos:definition "Refers to the morphological type of a spine."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1562245920,
SAO:1746643703,
SAO:1843037539,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1436578787"^^xsd:string .
SAO:1465673360 a owl:Class ;
rdfs:label "Pyramidal"^^xsd:string ;
skos:prefLabel "Pyramidal"^^xsd:string ;
skos:definition "Generally triangular-shaped soma with a dendrite emerging from the apical pole and basilar dendrites emerging from two or more basal poles"^^xsd:string ;
rdfs:subClassOf SAO:1126011106 ;
owl:disjointWith SAO:542875575,
SAO:957949983,
SAO:1595237779 ;
NIFRID:hasCurationStatus NIFRID:curation_complete ;
NIFRID:sao_ID "sao-1465673360"^^xsd:string .
SAO:1475145503 a owl:Class ;
rdfs:label "Clustered"^^xsd:string ;
skos:prefLabel "Clustered"^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:3169628,
SAO:296309608,
SAO:497641585,
SAO:548826380,
SAO:2082026326 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1475145503"^^xsd:string .
SAO:1510923311 a owl:Class ;
rdfs:label "Density"^^xsd:string ;
skos:prefLabel "Density"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:1779606731,
SAO:1788621392,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1510923311"^^xsd:string .
SAO:1562245920 a owl:Class ;
rdfs:label "Mitochondrial Quality"^^xsd:string ;
skos:prefLabel "Mitochondrial Quality"^^xsd:string ;
skos:definition "Refers to the morphology of mitochondria."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1746643703,
SAO:1843037539,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1562245920"^^xsd:string .
SAO:1583093969 a owl:Class ;
rdfs:label "Symmetrical"^^xsd:string ;
skos:prefLabel "Symmetrical"^^xsd:string ;
NIFRID:synonym "Gray's Type 2"^^xsd:string ;
skos:definition "Type of chemical synapse characterized by a thin post-synaptic density relatively equal in density to the pre-synaptic specialization giving the junction a symmetric appearance. This type of synapse is also characterized by flattened or pleiomorphic vesicles in the pre-synaptic terminal when fixed with aldehydes."^^xsd:string ;
rdfs:subClassOf SAO:1746643703 ;
owl:disjointWith SAO:2047438300 ;
rdfs:comment "see example at: http://synapse-web.org/anatomy/chemical/symh.htm"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:curation_complete ;
NIFRID:sao_ID "sao1583093969"^^xsd:string .
SAO:1595237779 a owl:Class ;
rdfs:label "Oval"^^xsd:string ;
skos:prefLabel "Oval"^^xsd:string ;
skos:definition "Generally rounded shape, where the minimum and maximum dimensions produce a roughly egg-shape."^^xsd:string ;
rdfs:subClassOf SAO:1126011106 ;
owl:disjointWith SAO:542875575,
SAO:957949983 ;
NIFRID:hasCurationStatus NIFRID:definition_incomplete ;
NIFRID:sao_ID "sao1595237779"^^xsd:string .
SAO:1643644091 a owl:Class ;
rdfs:label "Thin"^^xsd:string ;
skos:prefLabel "Thin"^^xsd:string ;
skos:definition "Characterized by the length being greater than the diameter of the neck, with the diameter of the head being similar to that of the neck (Harris et. al 1992)."^^xsd:string ;
rdfs:subClassOf SAO:2045795635 ;
owl:disjointWith SAO:268063700,
SAO:614188547,
SAO:941226261,
SAO:1786354232,
SAO:1983595164 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1643644091"^^xsd:string .
SAO:1649728317 a owl:Class ;
rdfs:label "In Vitro"^^xsd:string ;
skos:prefLabel "In Vitro"^^xsd:string ;
skos:definition "Indicates that the feature was observed in cells in culture or in isolated subcellular fractions."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1649728317"^^xsd:string .
SAO:1693353776 a owl:Class ;
rdfs:label "Fast Frozen Freeze Substituted"^^xsd:string ;
skos:prefLabel "Fast Frozen Freeze Substituted"^^xsd:string ;
skos:definition "Indicates that feature was described in tissue prepared by fast freezing followed by freeze substitution."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1693353776"^^xsd:string .
SAO:1694199019 a owl:Class ;
rdfs:label "Living Animal"^^xsd:string ;
skos:prefLabel "Living Animal"^^xsd:string ;
skos:definition "Indicates that the feature was observed in the living animal."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1694199019"^^xsd:string .
SAO:1703115805 a owl:Class ;
rdfs:label "Apical"^^xsd:string ;
skos:prefLabel "Apical"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1703115805"^^xsd:string .
SAO:1706854098 a owl:Class ;
rdfs:label "Varicose Dendrite Quality"^^xsd:string ;
skos:prefLabel "Varicose Dendrite"^^xsd:string ;
NIFRID:synonym "Varicose Dendrite"^^xsd:string ;
skos:definition "Characterized by numerous swellings or varicosities along their length."^^xsd:string ;
rdfs:subClassOf SAO:1959705051 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1706854098"^^xsd:string .
SAO:1746643703 a owl:Class ;
rdfs:label "Chemical Synapse Quality"^^xsd:string ;
skos:prefLabel "Chemical Synapse Quality"^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1843037539,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:definition_incomplete ;
NIFRID:sao_ID "sao1746643703"^^xsd:string ;
skos:example .
SAO:1746802704 a owl:Class ;
rdfs:label "Varicose Axon"^^xsd:string ;
skos:prefLabel "Varicose Axon"^^xsd:string ;
rdfs:subClassOf SAO:2088691397 ;
NIFRID:sao_ID "sao1746802704"^^xsd:string .
SAO:1757774791 a owl:Class ;
rdfs:label "Terminal Bouton"^^xsd:string ;
skos:prefLabel "Terminal Bouton"^^xsd:string ;
rdfs:subClassOf SAO:1189513296 ;
owl:disjointWith SAO:809320003 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1757774791"^^xsd:string ;
skos:example .
SAO:1779606731 a owl:Class ;
rdfs:label "Distance From Soma"^^xsd:string ;
skos:prefLabel "Distance From Soma"^^xsd:string ;
skos:definition "Distance, usually in linear microns, from soma where a feature is observed."^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:1788621392,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1779606731"^^xsd:string .
SAO:1785495506 a owl:Class ;
rdfs:label "Flattened"^^xsd:string ;
skos:prefLabel "Flattened"^^xsd:string ;
skos:definition "Characterized by a flattened shape in glutaraldehyde fixed tissue."^^xsd:string ;
rdfs:subClassOf SAO:1863391630 ;
owl:disjointWith SAO:854959971,
SAO:967304317 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1785495506"^^xsd:string .
SAO:1786354232 a owl:Class ;
rdfs:label "Stubby"^^xsd:string ;
skos:prefLabel "Stubby"^^xsd:string ;
skos:definition "Characterized by the diameter of the neck being similar to that of the head (Harris et. al 1992)."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
owl:disjointWith SAO:268063700,
SAO:614188547,
SAO:941226261,
SAO:1983595164,
SAO:2045795635 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1786354232"^^xsd:string .
SAO:1788621392 a owl:Class ;
rdfs:label "Surface Area"^^xsd:string ;
skos:prefLabel "Surface Area"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:196989303,
SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:2102170307,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1788621392"^^xsd:string .
SAO:1802798922 a owl:Class ;
rdfs:label "Functional State"^^xsd:string ;
skos:prefLabel "Functional State"^^xsd:string ;
skos:definition "Differentiates among different functional states of a cell or cell component, e.g., activated microglia, interphase nucleus, orthodox mitochondria."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:sao_ID "sao1802798922"^^xsd:string .
SAO:1843037539 a owl:Class ;
rdfs:label "Cristae Quality"^^xsd:string ;
skos:prefLabel "Cristae Quality"^^xsd:string ;
skos:definition "Refers to the morphology of mitochondrial cristae."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1863391630,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1843037539"^^xsd:string .
SAO:1845602529 a owl:Class ;
rdfs:label "Smooth Membrane"^^xsd:string ;
skos:prefLabel "Smooth Membrane"^^xsd:string ;
skos:definition "Characterized by a nuclear membrane with no indentations."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1845602529"^^xsd:string .
SAO:1863391630 a owl:Class ;
rdfs:label "Vesicle Quality"^^xsd:string ;
skos:prefLabel "Vesicle Quality"^^xsd:string ;
NIFRID:abbrev "Refers to the morphology of a vesicle."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:1959705051,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1863391630"^^xsd:string .
SAO:1959705051 a owl:Class ;
rdfs:label "Dendrite Quality"^^xsd:string ;
skos:prefLabel "Dendrite Quality"^^xsd:string ;
skos:definition "Characterization based on high or low density of classical spines on dendrites."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489,
SAO:2088691397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1959705051"^^xsd:string .
SAO:1960697157 a owl:Class ;
rdfs:label "Experimental Condition"^^xsd:string ;
skos:prefLabel "Experimental Condition"^^xsd:string ;
skos:definition "Indicates the experimental conditions under which a feature was observed."^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:pendingActionNote "All experimental entities will be ported into a separate ontology based on OBI"^^xsd:string ;
NIFRID:sao_ID "sao1960697157"^^xsd:string .
SAO:1983595164 a owl:Class ;
rdfs:label "Mushroom"^^xsd:string ;
skos:prefLabel "Mushroom"^^xsd:string ;
skos:definition "Characterized by the diameter of the head being much greater than that of the neck (Harris et. al 1992)."^^xsd:string ;
rdfs:subClassOf SAO:2045795635 ;
owl:disjointWith SAO:268063700,
SAO:614188547,
SAO:941226261 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1983595164"^^xsd:string .
SAO:1995010823 a owl:Class ;
rdfs:label "Lamellar"^^xsd:string ;
skos:prefLabel "Lamellar"^^xsd:string ;
skos:definition "Refers to cristae with a flattened, extended appearance."^^xsd:string ;
rdfs:subClassOf SAO:1843037539 ;
owl:disjointWith SAO:2110170574 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1995010823"^^xsd:string .
SAO:2045795635 a owl:Class ;
rdfs:label "Pedunculated"^^xsd:string ;
skos:prefLabel "Pedunculated"^^xsd:string ;
skos:definition "Type of spine characterized by a narrow neck of varying length attached to an expanded head (Jones and Powell 1969). It appears from the core:definition given by these authors that the thin and mushroom shaped categories are both included as subclasses of pedunculated."^^xsd:string ;
rdfs:subClassOf SAO:1436578787 ;
owl:disjointWith SAO:268063700,
SAO:614188547,
SAO:941226261 ;
rdfs:comment "May need to do more reading to determine whether this should be a parent of mushroom and thin."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao2045795635"^^xsd:string .
SAO:2047438300 a owl:Class ;
rdfs:label "Asymmetrical"^^xsd:string ;
skos:prefLabel "Asymmetrical"^^xsd:string ;
NIFRID:synonym "Gray's Type 1"^^xsd:string ;
skos:definition "Type of chemical synapse characterized by a pronounced and relatively thick post-synaptic density compared to the pre-synaptic specialization giving the junction an asymmetrical appearance. This type of synapse is also characterized by round, clear vesicles in the pre-synaptic terminal."^^xsd:string ;
rdfs:subClassOf SAO:1746643703 ;
rdfs:comment "see example at: http://synapse-web.org/anatomy/chemical/asymh.htm"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:curation_complete ;
NIFRID:sao_ID "sao2047438300"^^xsd:string .
SAO:2052625281 a owl:Class ;
rdfs:label "Atlas Location"^^xsd:string ;
skos:prefLabel "Atlas Location"^^xsd:string ;
rdfs:subClassOf SAO:943768255 ;
NIFRID:hasCurationStatus NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao2052625281"^^xsd:string .
SAO:2077793822 a owl:Class ;
rdfs:label "Radial"^^xsd:string ;
skos:prefLabel "Radial"^^xsd:string ;
rdfs:subClassOf SAO:271899308 ;
owl:disjointWith SAO:430240391,
SAO:679027665 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2077793822"^^xsd:string .
SAO:2082026326 a owl:Class ;
rdfs:label "Rosette"^^xsd:string ;
skos:prefLabel "Rosette"^^xsd:string ;
rdfs:subClassOf SAO:18717211 ;
owl:disjointWith SAO:3169628,
SAO:296309608,
SAO:497641585,
SAO:548826380 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2082026326"^^xsd:string .
SAO:2088691397 a owl:Class ;
rdfs:label "Axon Quality"^^xsd:string ;
skos:prefLabel "Axon Quality"^^xsd:string ;
skos:definition "Refers to the morphology of an axon."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
owl:disjointWith SAO:343486489 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2088691397"^^xsd:string .
SAO:2102170307 a owl:Class ;
rdfs:label "Speed"^^xsd:string ;
skos:prefLabel "Speed"^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:632949619,
SAO:824839913,
SAO:888175480,
SAO:2126482353 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2102170307"^^xsd:string .
SAO:2110170574 a owl:Class ;
rdfs:label "Tubular"^^xsd:string ;
skos:prefLabel "Tubular"^^xsd:string ;
skos:definition "Refers to crisate with a roughly circular profile in cross section."^^xsd:string ;
rdfs:subClassOf SAO:1843037539 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2110170574"^^xsd:string .
SAO:2126482353 a owl:Class ;
rdfs:label "Spacing"^^xsd:string ;
skos:prefLabel "Spacing"^^xsd:string ;
skos:definition "Refers to the average distance between features."^^xsd:string ;
rdfs:subClassOf SAO:279801585 ;
owl:disjointWith SAO:632949619,
SAO:824839913,
SAO:888175480 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2126482353"^^xsd:string .
SAO:2139310701 a owl:Class ;
rdfs:label "Plus To Minus"^^xsd:string ;
skos:prefLabel "Plus To Minus"^^xsd:string ;
rdfs:subClassOf SAO:107236050 ;
owl:disjointWith SAO:675186109 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2139310701"^^xsd:string .
SAO:3710738764 a owl:Class ;
rdfs:label "Aggregated"^^xsd:string ;
skos:prefLabel "Aggregated"^^xsd:string ;
skos:definition "Formed into a body or mass."^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao3710738764"^^xsd:string .
SAO:4092866126 a owl:Class ;
rdfs:label "Misfolded"^^xsd:string ;
skos:prefLabel "Misfolded"^^xsd:string ;
skos:definition "Pertains to formation of protein aggregates. There are varying degrees of \"misfolded\"."^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4092866126"^^xsd:string .
SAO:4152363223 a owl:Class ;
rdfs:label "Concentrated"^^xsd:string ;
skos:prefLabel "Concentrated"^^xsd:string ;
skos:definition "Indicates a group of objects exist in a large amount in a particular area."^^xsd:string ;
rdfs:subClassOf SAO:336034368 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4152363223"^^xsd:string .
SAO:4253573122 a owl:Class ;
rdfs:label "Globular"^^xsd:string ;
skos:prefLabel "Globular"^^xsd:string ;
skos:definition "Globe-shaped; having the form of a ball or sphere."^^xsd:string ;
rdfs:subClassOf SAO:6450066368 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4253573122"^^xsd:string .
SAO:4459136323 a owl:Class ;
rdfs:label "Spherical Lewy Body"^^xsd:string ;
skos:prefLabel "Spherical Lewy Body"^^xsd:string ;
skos:definition "Generally round shape where minimum diameter and maximum diameter are roughly the same."^^xsd:string ;
rdfs:subClassOf SAO:9946511970 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4459136323"^^xsd:string .
SAO:4531544124 a owl:Class ;
rdfs:label "Accumulated"^^xsd:string ;
skos:prefLabel "Accumulated"^^xsd:string ;
skos:definition "Indicates an increased number of objects that implies that the increase is due to a failure to break down or remove extra objects."^^xsd:string ;
rdfs:subClassOf SAO:336034368 ;
owl:versionInfo "130027"^^xsd:string ;
NIFRID:modifiedDate "October 22, 2010"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4531544124"^^xsd:string .
SAO:4985712724 a owl:Class ;
rdfs:label "Phosphorylated"^^xsd:string ;
skos:prefLabel "Phosphorylated"^^xsd:string ;
skos:definition "Indicates a phosphate (PO4) added to protein molecule or small molecule."^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4985712724"^^xsd:string .
SAO:5221865117 a owl:Class ;
rdfs:label "Filamentous"^^xsd:string ;
skos:prefLabel "Filamentous"^^xsd:string ;
skos:definition "Having a thread-like quality; consisting of filaments."^^xsd:string ;
rdfs:subClassOf SAO:6450066368 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao5221865117"^^xsd:string .
SAO:5413665309 a owl:Class ;
rdfs:label "Activated"^^xsd:string ;
skos:prefLabel "Activated"^^xsd:string ;
skos:definition "Microglial activation, e.g., in brain injury, is characterized by enlargement, changes in shape, and increased synthesis of cytokines such as IL-1. There are three subtypes: primed, enlarged, phagocytic"^^xsd:string ;
rdfs:subClassOf SAO:9222381184 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
dc:source "Sheng JG et al. 1997. Neuritic plaque evolution in Alzheimer's disease is accompanied by transition of activated microglia from primed to enlarged to phagocytic forms. Acta Neuropathol 94:1-5."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao5413665309"^^xsd:string .
SAO:5798413869 a owl:Class ;
rdfs:label "Molecular Quality"^^xsd:string ;
skos:prefLabel "Molecular Quality"^^xsd:string ;
skos:definition "Descriptive terms pertaining to molecular qualities."^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao5798413869"^^xsd:string .
SAO:6363641087 a owl:Class ;
rdfs:label "Nonactivated"^^xsd:string ;
skos:prefLabel "Nonactivated"^^xsd:string ;
skos:definition "A microglia that is not activated."^^xsd:string ;
rdfs:subClassOf SAO:9222381184 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao6363641087"^^xsd:string .
SAO:6450066368 a owl:Class ;
rdfs:label "Molecular Configuration"^^xsd:string ;
skos:prefLabel "Molecular Configuration"^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:pendingActionNote "We need to consult the protein community to find the most accurate location for Molecular Configuration."^^xsd:string ;
NIFRID:sao_ID "sao6450066368"^^xsd:string .
SAO:6934064108 a owl:Class ;
rdfs:label "Granule"^^xsd:string ;
skos:prefLabel "Granule"^^xsd:string ;
rdfs:subClassOf SAO:1278200674 ;
rdfs:comment "small numerous cell"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao6934064108"^^xsd:string ;
skos:example .
SAO:8314803620 a owl:Class ;
rdfs:label "Nitrated"^^xsd:string ;
skos:prefLabel "Nitrated"^^xsd:string ;
skos:definition "Combined, or impregnated, with nitric acid, or some of its compounds."^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao8314803620"^^xsd:string .
SAO:9222381184 a owl:Class ;
rdfs:label "Functional Quality for Microglia"^^xsd:string ;
skos:prefLabel "Functional Quality for Microglia"^^xsd:string ;
skos:definition "Terms to describe the functional state of microglia."^^xsd:string ;
rdfs:subClassOf BFO:0000019 ;
rdfs:comment "We are not sure this is exactly how to solve this issue. Do we want this to be a state quality?"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9222381184"^^xsd:string .
SAO:9271919883 a owl:Class ;
rdfs:label "Stellate"^^xsd:string ;
skos:prefLabel "Stellate"^^xsd:string ;
skos:definition "Generally star shaped multipoloar cell shpae with spherically extending processes"^^xsd:string ;
rdfs:subClassOf SAO:1278200674 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9271919883"^^xsd:string .
SAO:9291838256 a owl:Class ;
rdfs:label "Ubiquinated"^^xsd:string ;
skos:prefLabel "Ubiquinated"^^xsd:string ;
NIFRID:synonym "Ubiquitylation"^^xsd:string ;
skos:definition "Pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomers. This labels proteins for proteasomal degradation and controls the stability, function, and intracellular localization of a wide variety of proteins."^^xsd:string,
"Protein ubiquitination is the process by which one or more ubiquitin moieties are added to a protein. (Gene Ontology)"^^xsd:string ;
rdfs:subClassOf SAO:5798413869 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9291838256"^^xsd:string .
SAO:9946511970 a owl:Class ;
rdfs:label "Lewy Body Quality"^^xsd:string ;
skos:prefLabel "Lewy Body Quality"^^xsd:string ;
skos:definition "Labels that refer to the morphological characteristics of a Lewy Body."^^xsd:string ;
rdfs:subClassOf SAO:1057800815 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9946511970"^^xsd:string .
### Serialized using the pyontutils deterministic serializer v1.1.3