@prefix : .
@prefix BFO: .
@prefix BIRNLEX: .
@prefix dc: .
@prefix hasPart: .
@prefix NIFEXT: .
@prefix NIFRID: .
@prefix NIFSTD: .
@prefix NLX: .
@prefix NLXSUB: .
@prefix oboInOwl: .
@prefix owl: .
@prefix rdf: .
@prefix rdfs: .
@prefix SAO: .
@prefix skos: .
@prefix xml: .
@prefix xsd: .
a owl:Ontology ;
owl:imports ;
dc:title "NIF-Subcellular: contains cell parts and subcellular structures from SAO-CORE and Gene Ontology Cellular Component (GO-CC)"^^xsd:string ;
rdfs:comment "next ID: nlx_subcell_20090212"^^xsd:string ;
skos:changeNote """v1.1 (February, 2009) - * Duplicate classes from SAO (sao_ and nifext_ prefixed IDs) has been eliminated as identified in the NeuroLex wiki. While retiring the duplicate classes, kept the ones with most detailed annotations or merged the annotation (synonyms, definitions etc) into the ones that had more/better information regardless of their IDs with sao or nifext prefixes. * Not all sao prefixed IDs are out of date or replaced by nifext.
v.1.0 (January, 2009) - Updated with simplified import hierarchy of upper level ontologies as part of the transition from NIFSTD 0.5 to 1.0.
v1.2 (July, 2009) - New terms have been added since the January release (ID used: nlx_subcell_20090101 - 20090703)
v1.3 (May, 2012) - New terms have been added from NeuroLex.
v1.3.1 (July, 2013) - Older PURL links are replaced with the new ones."""^^xsd:string ;
owl:versionInfo "1.3.1 (July 15, 2013)"^^xsd:string ;
oboInOwl:hasSubset ,
,
,
,
,
,
.
### Object Properties
hasPart: a owl:ObjectProperty .
NIFRID:has_proper_part a owl:ObjectProperty .
NIFRID:proper_part_of a owl:ObjectProperty .
### Classes
BIRNLEX:10 a owl:Class ;
owl:deprecated true ;
rdfs:label "Constitutional part of cell"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:createdDate "2006-09-07"^^xsd:string ;
dc:contributor "Bill Bug"^^xsd:string ;
NIFRID:hasExternalSource "UMLS"^^xsd:string ;
skos:example "cytoskeletal system"^^xsd:string,
"post-synaptic density"^^xsd:string .
BIRNLEX:13 a owl:Class ;
rdfs:label "Sample population"^^xsd:string ;
skos:prefLabel "Sample population"^^xsd:string ;
rdfs:subClassOf SAO:2254405550 ;
NIFRID:createdDate "2006-09-07"^^xsd:string ;
NIFRID:modifiedDate "2006-10-09"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Bill_Bug ;
NIFRID:tempDefinition "A defined subset of a population whose spatio-temporal interactions or aggregate behavior is representative of the whole population."^^xsd:string .
BIRNLEX:788 a owl:Class ;
owl:deprecated true ;
rdfs:label "Microtubule"^^xsd:string ;
skos:prefLabel "Microtubule"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
owl:disjointWith BIRNLEX:879,
BIRNLEX:888 ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Maryann_Martone ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasExternalSource NIFRID:UMLS ;
NIFRID:isReplacedByClass SAO:1846835077 ;
NIFRID:UmlsCui "C0026046"^^xsd:string .
BIRNLEX:846 a owl:Class ;
owl:deprecated true ;
rdfs:label "Neurofilament"^^xsd:string ;
skos:prefLabel "Neurofilament"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:BIRN_OTF ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:isReplacedByClass SAO:1316272517 .
BIRNLEX:878 a owl:Class ;
owl:deprecated true ;
rdfs:label "Cytoskeletal system"^^xsd:string ;
NIFRID:synonym "cytoskeleton"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "February 18, 2010"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:isReplacedByClass SAO:1635329413 .
BIRNLEX:879 a owl:Class ;
owl:deprecated true ;
rdfs:label "Intermediate filament"^^xsd:string ;
skos:prefLabel "Intermediate filament"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
owl:disjointWith BIRNLEX:888 ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:birnlexDefinition "Cytoskeletal element consisting of elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: keratin filaments of mammalian epithelial cells; desmin filaments found in cells of muscles of all types; vimentin filaments found in mesenchymal cells; neurofilaments of neurons; and glial filaments found in all types of glial cells (Gene Ontology)."^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Maryann_Martone ;
NIFRID:hasCurationStatus NIFRID:pending_final_vetting ;
NIFRID:hasExternalSource NIFRID:UMLS ;
NIFRID:isReplacedByClass SAO:952483289 ;
NIFRID:UmlsCui "C0021770"^^xsd:string .
BIRNLEX:886 a owl:Class ;
owl:deprecated true ;
rdfs:label "Post synaptic density"^^xsd:string ;
skos:prefLabel "Post synaptic density"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:bonfireID "BF_C000103"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Maryann_Martone ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:isReplacedByClass SAO:1196688972 .
BIRNLEX:888 a owl:Class ;
owl:deprecated true ;
rdfs:label "Microfilament"^^xsd:string ;
skos:prefLabel "Microfilament"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:BIRN_OTF ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:isReplacedByClass SAO:2006047981 .
BIRNLEX:1142 a owl:Class ;
owl:deprecated true ;
rdfs:label "Neuropil"^^xsd:string ;
skos:prefLabel "Neuropil"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
rdfs:comment "This class has been retired."^^xsd:string ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "May 15, 2009"^^xsd:string ;
NIFRID:externallySourcedDefinition "Supracellular structure consisting of a dense intricate feltwork of interwoven fine glial processes, fibrils, synaptic terminals, axons, and dendrites interspersed among the nerve cells in the gray matter of the central nervous system."^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Maryann_Martone ;
NIFRID:hasCurationStatus NIFRID:pending_final_vetting ;
NIFRID:hasDefinitionSource NIFRID:MeSH_defSource ;
NIFRID:hasExternalSource NIFRID:UMLS ;
NIFRID:hasFormerParentClass BIRNLEX:3 ;
NIFRID:isReplacedByClass SAO:205380252 ;
NIFRID:UmlsCui "C0228081"^^xsd:string .
BIRNLEX:1152_2 a owl:Class ;
rdfs:label "Node of Ranvier"^^xsd:string ;
skos:prefLabel "Node of Ranvier"^^xsd:string ;
skos:definition "Site located at the gaps in the myelin sheaths of myelinated axons. Axon diameter is generally decreased in the nodal region, compared to the internode. Ranvier's nodes allow saltatory conduction, that is, jumping of impulses from node to node, which is faster and more energetically favorable than continuous conduction (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:596411490 ;
NIFRID:createdDate "2006-07-15"^^xsd:string ;
NIFRID:modifiedDate "2006-09-28"^^xsd:string ;
NIFRID:birnlexDefinition "Specialized supracellular structures found in myelinated axons at the gaps between the myelin sheaths. The Node of Ranvier consists of the axonal membrane at the gap, the surrounding myelin processes and additional components such as astrocytic processes or basal lamina, depending upon whether the Node occurs in axons in the peripheral or central nervous system."^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Maryann_Martone ;
NIFRID:hasCurationStatus NIFRID:pending_final_vetting ;
NIFRID:hasExternalSource NIFRID:UMLS ;
NIFRID:UmlsCui "C0034667"^^xsd:string .
BIRNLEX:2534 a owl:Class ;
rdfs:label "Intrinsic neuron role"^^xsd:string ;
skos:prefLabel "Intrinsic neuron role"^^xsd:string ;
NIFRID:synonym "intrinsic neuron"^^xsd:string,
"local circuit neuron"^^xsd:string,
"local circuit neuron role"^^xsd:string ;
rdfs:subClassOf BIRNLEX:2537 ;
owl:disjointWith NLXSUB:1008001 ;
rdfs:comment "We are leaving off \"interneuron\" for now, as it has different connotations in vertebrates and invertebrates"^^xsd:string ;
NIFRID:createdDate "2007-08-26"^^xsd:string ;
NIFRID:modifiedDate "March 31, 2009"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Bill_Bug ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:tempDefinition "An interneuron participating in aneuronal circuit where all the neurons are bounded within a defined and limited region of the nervous system.(BB)."^^xsd:string .
BIRNLEX:2536 a owl:Class ;
rdfs:label "Functional role of cell"^^xsd:string ;
skos:prefLabel "Functional role of cell"^^xsd:string ;
rdfs:subClassOf NLXSUB:090803 ;
NIFRID:createdDate "2007-08-25"^^xsd:string ;
NIFRID:modifiedDate "August 20, 2009"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Bill_Bug ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass BFO:0000023 .
BIRNLEX:2537 a owl:Class ;
rdfs:label "Functional role of nerve cell"^^xsd:string ;
skos:prefLabel "Functional role of nerve cell"^^xsd:string ;
rdfs:subClassOf BIRNLEX:2536 ;
NIFRID:createdDate "2007-08-25"^^xsd:string ;
NIFRID:modifiedDate "2007-08-25"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Bill_Bug ;
NIFRID:hasCurationStatus NIFRID:uncurated .
NIFEXT:142 a owl:Class ;
rdfs:subClassOf owl:DeprecatedClass .
NIFSTD:FMA_83604 a owl:Class ;
rdfs:label "Pacinian corpuscle"^^xsd:string ;
skos:definition "Encapsulated nerve ending located in skin composed of nerve ending of a dorsal root ganglion neuron wrapped in 20-60 concentric lamellae composed of fibrous tissue and fibroblasts. They function as mechanoreceptors for pressure (adapted from Wikipedia)"^^xsd:string ;
rdfs:subClassOf NLXSUB:20090505 ;
NIFRID:createdDate "February 23, 2010"^^xsd:string ;
NIFRID:definingCitation "Foundational Model of Anatomy"^^xsd:string .
NIFSTD:FMA_83605 a owl:Class ;
rdfs:label "Meissners corpuscle"^^xsd:string ;
NIFRID:synonym "Meisner's corpuscle"^^xsd:string,
"Meisners corpuscle"^^xsd:string,
"Meissner's corpuscle"^^xsd:string,
"tactile corpuscle"^^xsd:string ;
skos:definition "Meissner's corpuscles are encapsulated nerve endings of dorsal root ganglion cells. They are located in skin, which consist of flattened supportive cells arranged as horizontal lamellae surrounded by a connective tissue capsule, that function as mechanoreceptors for light touch. The corpuscle is between 30-140 μm in length and 40-60 μm in diameter."^^xsd:string ;
rdfs:subClassOf NLXSUB:20090505 .
NIFSTD:FMA_83606 a owl:Class ;
rdfs:label "Merkels disc"^^xsd:string ;
NIFRID:synonym "Merkel cell-neurite complex"^^xsd:string,
"Merkel disk receptor"^^xsd:string,
"Merkel's disc"^^xsd:string,
"Merkel's disk"^^xsd:string ;
skos:definition "Encapsulated nerve ending formed by the neurite of a dorsal root ganglion cell in close apposition to a Merkel cell found in the basal layer of glabrous and hairy skin, in hair follicles, and in oral and anal mucosa. The Merkel disc functions as a sensory receptor for pressure and texture information (adapted from Wikipedia)"^^xsd:string ;
rdfs:subClassOf NLXSUB:20090505 ;
NIFRID:createdDate "February 23, 2010"^^xsd:string ;
NIFRID:definingCitation "Foundational Model of Anatomy"^^xsd:string .
NLX:330 a owl:Class ;
rdfs:label "Parallel fiber"^^xsd:string ;
skos:definition "Regional part of a cerebellar granule cell axon referring to the bifurcation of the granule cell axon in the molecular layer into two diametrically opposed branches that are oriented parallel to the long axis of the folium. (adapted from Shepherd, G. M. The synaptic organization of the brain, 5th ed. New York: Oxford University Press, 2004."^^xsd:string ;
rdfs:subClassOf NLXSUB:100307 ;
NIFRID:createdDate "March 17, 2010"^^xsd:string .
NLX:467 a owl:Class ;
rdfs:label "Thorny excrescence"^^xsd:string ;
skos:definition "Large complex spine. Each excrescence is formed by a cluster of spine heads (Amaral, 1978)"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
NIFRID:createdDate "May 11, 2010"^^xsd:string ;
NIFRID:definingCitation "The Hippocampus book by Andersen et al."^^xsd:string .
NLX:151681 a owl:Class ;
rdfs:label "Complex laminated body" ;
dc:description "Cytoplasmic organelles described in some lateral geniculate neurons composed of sheets of tubules (25 nm in diameter) separated by dense material (about 75 nm wide), which together with the tubules whorl give a structure resembling a 'finger-print '. In 2 um thick Epon-Araldite sections stained with methylene-blue and Azure II, CLBs are dark blue, round or oval bodies of the same order of size as the nucleolus."@en ;
rdfs:subClassOf SAO:506721981 ;
owl:versionInfo "201976"@en ;
NIFRID:createdDate "November 8, 2012"@en ;
dc:contributor "Maryann Martone"@en ;
NIFRID:definingCitation "Winfield DA (1982) A quantitative study of the complex laminated body in the lateral geniculate nucleus of the cat. Brain Res 235: 17-30. PubMed:7188322"@en .
NLXSUB:090801 a owl:Class ;
rdfs:label "Glial Inclusion"^^xsd:string ;
skos:prefLabel "Glial Inclusion"^^xsd:string ;
NIFRID:synonym "Argyrophilic Glial Inclusion"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "August 11, 2009"^^xsd:string ;
dc:contributor "Jane Bugea"^^xsd:string .
NLXSUB:090802 a owl:Class ;
rdfs:label "Neuronal Cytoplasmic Inclusion"^^xsd:string ;
skos:prefLabel "Neuronal Cytoplasmic Inclusion"^^xsd:string ;
NIFRID:abbrev "NCI"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "August 11, 2009"^^xsd:string ;
dc:contributor "Jane Bugea"^^xsd:string .
NLXSUB:090803 a owl:Class ;
rdfs:label "Cell role"^^xsd:string ;
rdfs:subClassOf BFO:0000023 ;
NIFRID:createdDate "August 20, 2009"^^xsd:string .
NLXSUB:090901 a owl:Class ;
rdfs:label "Cajal body"^^xsd:string ;
NIFRID:synonym "Coiled body"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "August 31, 2009"^^xsd:string ;
NIFRID:modifiedDate "February 17, 2010"^^xsd:string ;
dc:contributor "Jane Bugea"^^xsd:string ;
NIFRID:definingCitationURI ;
NIFRID:gene_Ontology_ID "GO_0015030"^^xsd:string .
NLXSUB:091021 a owl:Class ;
rdfs:label "Mossy fiber rosette"^^xsd:string ;
skos:definition "A synapse of the mossy fiber onto the dendrite of a granule cell; each mossy fiber can have up to 50 rosettes. (source: http://www.neuroanatomy.wisc.edu/cere/text/P4/mossy.htm) (http://en.wikipedia.org/wiki/Mossy_fiber_(cerebellum))"^^xsd:string ;
rdfs:subClassOf SAO:914572699 ;
NIFRID:createdDate "October 5, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string .
NLXSUB:100203 a owl:Class ;
rdfs:label "Grumose foamy spheroid body"^^xsd:string ;
skos:definition "Grumose foamy spheroid body is a spheroidal supracellular structure with a foamy appearance in haematoxylin and eosin stains that vary from 10 to 50 microns in diameter and contain amorphous debris-like material found in the brains in certain neurodegenerative conditions."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
NIFRID:createdDate "February 12, 2010"^^xsd:string ;
NIFRID:PMID "PMID: 7477732"^^xsd:string .
NLXSUB:100205 a owl:Class ;
rdfs:label "Blood brain barrier"^^xsd:string ;
NIFRID:synonym "Blood-brain barrier"^^xsd:string ;
NIFRID:abbrev "BBB"^^xsd:string ;
skos:definition "A supracellular structure formed by tight junctions between capillary endothelial cells in the brain that prevents substances from entering the brain from the vasculature, except by passage of substances through the endothelial cell."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
rdfs:comment "The BBB has also been defined physiologically"^^xsd:string .
NLXSUB:100206 a owl:Class ;
rdfs:label "F bouton"^^xsd:string ;
skos:definition "Synaptic bouton found in the ventral horn of the spinal cord that range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles in electron microscopic preparations."^^xsd:string ;
rdfs:subClassOf SAO:187426937 ;
NIFRID:createdDate "February 23, 2010"^^xsd:string .
NLXSUB:100207 a owl:Class ;
rdfs:label "S bouton"^^xsd:string ;
skos:definition "Synaptic bouton found in the ventral horn of the spinal cord. S boutons range in size from 0.5 to 8 um in diameter and contain spherical synaptic vesicles, as determined by electron microscopy"^^xsd:string ;
rdfs:subClassOf SAO:187426937 ;
NIFRID:createdDate "February 23, 2010"^^xsd:string .
NLXSUB:100208 a owl:Class ;
rdfs:label "C bouton"^^xsd:string ;
skos:definition "Synaptic bouton found in spinal cord on the soma and proximal dendrites of motor neurons"^^xsd:string ;
rdfs:subClassOf SAO:187426937 ;
NIFRID:createdDate "February 23, 2010"^^xsd:string .
NLXSUB:100209 a owl:Class ;
rdfs:label "Glia limitans"^^xsd:string ;
NIFRID:synonym "glial limiting membrane"^^xsd:string ;
skos:definition "The meshwork of astrocytic foot processes (glial end feet) covered by a basal lamina adjacent to the inner pial surface of the central nervous system."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
NIFRID:createdDate "February 10, 2010"^^xsd:string .
NLXSUB:100210 a owl:Class ;
rdfs:label "Glial scar"^^xsd:string ;
skos:definition "Fibrous scar consisting predominately of reactive astrocytes, microglia and extracellular matrix molecules formed after injury to the central nervous system (adapted from Rolls et al., Nature Reviews Neuroscience 10: 235, 2009)"^^xsd:string ;
rdfs:subClassOf SAO:508165343 .
NLXSUB:100307 a owl:Class ;
rdfs:label "Regional Part Of Granule Cell Axon"^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
NIFRID:createdDate "March 17, 2010"^^xsd:string .
NLXSUB:100312 a owl:Class ;
rdfs:label "Hippocampal mossy fiber"^^xsd:string ;
NIFRID:synonym "Dentate gyrus mossy fiber"^^xsd:string ;
skos:definition "Axon of dentate gyrus granule cell projecting to hippocampal area CA3, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal."^^xsd:string ;
rdfs:subClassOf SAO:1770195789 ;
NIFRID:createdDate "March 18, 2010"^^xsd:string ;
NIFRID:modifiedDate "April 28, 2010"^^xsd:string .
NLXSUB:100315 a owl:Class ;
rdfs:label "Subcellular entity"^^xsd:string ;
skos:altLabel "subcellular_structure"^^xsd:string ;
skos:definition "Entity derived from a cell or cells. The anatomical scale of these objects roughly corresponds to that which would be visible in high resolution light microscopy or conventional electron microscopy, e.g., nanometers to microns. Example: mitochondrion, dendrite, extracellular matrix."^^xsd:string ;
rdfs:subClassOf BFO:0000040 ;
NIFRID:createdDate "March 15, 2010"^^xsd:string ;
dc:contributor "Maryann Marotone"^^xsd:string .
NLXSUB:1005001 a owl:Class ;
rdfs:label "CA3 pyramidal cell dendrite"^^xsd:string ;
skos:definition "Dendrite of a hippocampal CA3 pyramidal cell"^^xsd:string ;
rdfs:subClassOf SAO:1211023249 ;
NIFRID:createdDate "May 11, 2010"^^xsd:string .
NLXSUB:1005002 a owl:Class ;
rdfs:label "Hippocampal mossy fiber expansion"^^xsd:string ;
NIFRID:synonym "dentate gyrus granule cell axonal bouton"^^xsd:string,
"dentate gyrus mossy fiber expansion"^^xsd:string,
"mossy fiber expansion"^^xsd:string ;
skos:definition "Synaptic expansion of hippocampal mossy fiber axon that makes contact with the thorny excrescences of hippocampal CA3 pyramidal cell dendrites"^^xsd:string ;
rdfs:subClassOf SAO:187426937 ;
NIFRID:createdDate "May 11, 2010"^^xsd:string .
NLXSUB:1005003 a owl:Class ;
rdfs:label "Gemmule"^^xsd:string ;
skos:definition "spine-like process found on some neurons, e.g., periglomerular cells of olfactory cortex"^^xsd:string ;
rdfs:subClassOf SAO:250931889 ;
NIFRID:createdDate "May 11, 2010"^^xsd:string .
NLXSUB:1008001 a owl:Class ;
rdfs:label "Principal neuron role"^^xsd:string ;
skos:prefLabel "Principal neuron role"^^xsd:string ;
NIFRID:synonym "Principal neuron"^^xsd:string,
"Projection neuron"^^xsd:string,
"Projection neuron role"^^xsd:string ;
rdfs:subClassOf BIRNLEX:2537 ;
NIFRID:createdDate "2007-08-26"^^xsd:string ;
NIFRID:modifiedDate "March 31, 2009"^^xsd:string ;
NIFRID:hasBirnlexCurator NIFRID:Bill_Bug ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:tempDefinition "A principal projection neuron in a neuronal circuit whose axon extends beyond the region where its soma is located to synapse on the dendrites of cells in other regions of the nervous system (BB)."^^xsd:string ;
skos:example "CA3 Pyramidal neurons are principal neurons projecting out of the CA3 cytoarchitectural part of the hippocampus of vertebrates."^^xsd:string,
"Cerebellar Purkinje neurons are principal neurons projecting out from the cerebellar cortex of vertebrates."^^xsd:string .
NLXSUB:20090101 a owl:Class ;
rdfs:label "Bunina Body"^^xsd:string ;
skos:prefLabel "Bunina Body"^^xsd:string ;
skos:definition "Bunina bodies are small eosinphilic granular inclusions that are 1-3 microns in diameter in the anterior horn cells, appearing either singly or in a group. Sometimes they are arranded in small beaded chains. They stain bright red with hematoxylin and eosin (H&E) staining, deep blue with phospotungstic acid hematoxylin and blue with Luxol fast blue. They express cystatin C and consist of electron-dense amorphous material that contains tubules or vesicular structures. The amorphous material frequently includes a cytoplasmis island containing neurofilaments and other micro-organelles."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:definingCitationID "PMID: 18026741"^^xsd:string .
NLXSUB:20090102 a owl:Class ;
rdfs:label "Pick Body"^^xsd:string ;
skos:prefLabel "Pick Body"^^xsd:string ;
skos:definition "Pick Bodies are composed of numerous tau fibrils arranged in a disorderly array. Tau protein is a major component. Pick bodies also stain for ubiquitin, alpha-synuclein, and apolipoprotein E."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string .
NLXSUB:20090103 a owl:Class ;
rdfs:label "Skein-like Inclusion"^^xsd:string ;
skos:prefLabel "Skein-like Inclusion"^^xsd:string ;
skos:definition "Skein-like inclusions are intracytoplasmic filamentous structures that are frequently encountered in preparations immunostained for ubiquitin. In H&E preparations (staining with hematoxylin and eosin) they are hardly visible or sometimes detected as faintly eosinophilic structures."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:definingCitationID "PMID: 18026741"^^xsd:string .
NLXSUB:20090104 a owl:Class ;
rdfs:label "Hyaline Inclusion"^^xsd:string ;
skos:prefLabel "Hyaline Inclusion"^^xsd:string ;
skos:definition "Pale eosinophilic inclusions with halos in H&E (hematoxylin and eosin) preparations."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string .
NLXSUB:20090105 a owl:Class ;
rdfs:label "Lewy Body-like Hyaline Inclusion"^^xsd:string ;
skos:prefLabel "Lewy Body-like Hyaline Inclusion"^^xsd:string ;
skos:definition "In H&E preparations, neuronal LBHIs show an eosinphilic core with a paler peripheral halo, and their name is derived from their H&E staining features, which resemble those of Lewy bodies in patients with Parkinson's disease. Neuronal Lewy Body-like Hyaline Inclusions consist of filaments and granular materials, exhibit dense cores with rough preipheral halos and lack a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:definingCitation "Kato S. 2008 Amyotrophic lateral sclerosis models and human neuropathology: similarities and differences. Acta Neuropathol 115:97-114. page 101"^^xsd:string .
NLXSUB:20090106 a owl:Class ;
rdfs:label "Transferrin"^^xsd:string ;
skos:prefLabel "Transferrin"^^xsd:string ;
skos:definition "Transferrin is a blood plasma protein for iron ion delivery which in humans is encoded by the TF gene."^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:createdDate "January 9, 2009"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string .
NLXSUB:20090201 a owl:Class ;
rdfs:label "Star-shaped Neurofibrillary Tangle"^^xsd:string ;
skos:prefLabel "Star-shaped Neurofibrillary Tangle"^^xsd:string ;
rdfs:subClassOf SAO:2409833926 ;
NIFRID:createdDate "February 12, 2009"^^xsd:string .
NLXSUB:20090202 a owl:Class ;
rdfs:label "Flame-shaped Neurofibrillary Tangle"^^xsd:string ;
skos:prefLabel "Flame-shaped Neurofibrillary Tangle"^^xsd:string ;
rdfs:subClassOf SAO:2409833926 ;
NIFRID:createdDate "February 12, 2009"^^xsd:string .
NLXSUB:20090203 a owl:Class ;
rdfs:label "Climbing fiber"^^xsd:string ;
skos:prefLabel "Climbing fiber"^^xsd:string ;
skos:definition "Axon of inferior olive neuron that projects to the cerebellar cortex, largely via the inferior cerebellar peduncle. They range in diameter from 1-3 um and are myelinated util they enter the granule cell layer. They give off collaterals to the deep cerebellar nuclei. They synapse extensively with the dendrites of Purkinje cells in the molecular layer, where each fiber branches repeatedly to \"climb\" along the Purkinje cell dendritic tree. Each Purkinje cell is innervated by only a single climbing fiber."^^xsd:string ;
rdfs:subClassOf SAO:1770195789 ;
NIFRID:createdDate "February 12, 2009"^^xsd:string ;
NIFRID:definingCitation "Shepherd, G. M. The Synaptic organization of the brain, 5th ed., New York: Oxford University Press, 2004."^^xsd:string .
NLXSUB:20090204 a owl:Class ;
rdfs:label "Astrocyte Sheath"^^xsd:string ;
skos:prefLabel "Astrocyte Sheath"^^xsd:string ;
rdfs:subClassOf SAO:1630537580 ;
NIFRID:createdDate "February 12, 2009"^^xsd:string .
NLXSUB:20090205 a owl:Class ;
rdfs:label "Cytochrome c"^^xsd:string ;
skos:prefLabel "Cytochrome c"^^xsd:string ;
skos:definition "A small heme protein found loosely associated with the inner membrane of the mitochondrion."^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:createdDate "February 23, 2009"^^xsd:string .
NLXSUB:20090206 a owl:Class ;
rdfs:label "Proteasome"^^xsd:string ;
skos:prefLabel "Proteasome"^^xsd:string ;
skos:definition "Proteasomes are large protein complexes inside all eukaryotes and archaea, as well as in some bacteria. In eukaryotes, they are located in the nucleus and the cytoplasm."^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:createdDate "February 23, 2009"^^xsd:string .
NLXSUB:20090207 a owl:Class ;
rdfs:label "Synaptophysin"^^xsd:string ;
skos:prefLabel "Synaptophysin"^^xsd:string ;
skos:definition "Synaptophysin (syp I) is a synaptic vesicle membrane protein"^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:createdDate "February 24, 2009"^^xsd:string .
NLXSUB:20090208 a owl:Class ;
rdfs:label "Endoneurial Space"^^xsd:string ;
skos:definition "The space occupied by the endoneurium."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
NIFRID:createdDate "February 24, 2009"^^xsd:string .
NLXSUB:20090209 a owl:Class ;
rdfs:label "Cerebellar mossy fiber"^^xsd:string ;
skos:prefLabel "Cerebellar mossy fiber"^^xsd:string ;
skos:definition "Axon arising from cerebellar projecting cells in the cochlea, vestibular nuclei, spinal cord, reticular formation, cerebellar nuclei and basilar pontine nuclei. Mossy fibers enter through all three cerebellar peduncles and send collaterals to the deep cerebellar nuclei, then branch in the white matter and terminate in the granule cell layer. Through this branching, a given mossy fiber can innervate several folia. Mossy fibers synapse on granule cells. The synaptic contacts are made at enlargements along the length of the mossy fiber called mossy fiber rosettes. The enlargements of the rosettes give the axons as \"mossy\" appearance in Golgi stained preparations. (adapted from Shepherd, G. M. The synaptic organization of the brain, 5th ed. New York: Oxford University Press, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:1770195789 ;
NIFRID:createdDate "February 27, 2009"^^xsd:string ;
NIFRID:definingCitation "Shepherd, G. M. The synaptic organization of the brain, 5th ed. New York: Oxford University Press, 2004"^^xsd:string .
NLXSUB:20090210 a owl:Class ;
rdfs:label "C-fiber"^^xsd:string ;
skos:prefLabel "C-fiber"^^xsd:string ;
skos:definition "The axon of dorsal root ganglion cells that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated."^^xsd:string ;
rdfs:subClassOf SAO:1770195789 ;
NIFRID:createdDate "February 27, 2009"^^xsd:string .
NLXSUB:20090211 a owl:Class ;
rdfs:label "Calnexin"^^xsd:string ;
skos:prefLabel "Calnexin"^^xsd:string ;
skos:definition "Calnexin (CNX) is a 90kDa integral protein of the endoplasmic reticulum (ER). It consists of a large (50 kDa) N-terminal calcium-binding lumenal domain, a single transmembrane helix and a short (90 residues), acidic cytoplasmic tail."^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:createdDate "February 27, 2009"^^xsd:string .
NLXSUB:20090501 a owl:Class ;
rdfs:label "Triad"^^xsd:string ;
skos:definition "Synaptic arrangement observed in thalamic glomeruli consisting of a afferent terminal synapsing on both an interneuron axon terminal and the dendrite of a relay cell. The interneuron terminal also synapses on the dendrite of a relay cell, forming a triadic arrangement."^^xsd:string ;
rdfs:subClassOf SAO:205380252 ;
NIFRID:createdDate "May 15, 2009"^^xsd:string .
NLXSUB:20090502 a owl:Class ;
rdfs:label "Cerebellar glomerulus"^^xsd:string ;
rdfs:subClassOf SAO:587858733 ;
NIFRID:createdDate "May 16, 2009"^^xsd:string .
NLXSUB:20090503 a owl:Class ;
rdfs:label "Olfactory glomerulus"^^xsd:string ;
skos:definition "Glomerulus located in the olfactory bulb formed by the incoming axons of olfactory receptor cells synapsing onto the dendritic branches of one or more mitral cells. The olfactory glomerulus is roughly spherical and is partially or wholly encapsulated by glial processes."^^xsd:string ;
rdfs:subClassOf SAO:587858733 ;
NIFRID:createdDate "May 16, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090504 a owl:Class ;
rdfs:label "Thalamic glomerulus"^^xsd:string ;
skos:definition "Synaptic structure found in thalamic relay nuclei consising of a complex of afferent terminals, relay cell dendrites, interneuron dendrites and other processes. These complexes are surrounded by astrocytic processes."^^xsd:string ;
rdfs:subClassOf SAO:587858733 ;
NIFRID:createdDate "May 16, 2009"^^xsd:string ;
NIFRID:definingCitation "Shepherd, G. M. The synaptic organization of the brain, 5th ed New York: Oxford University Press, 2005"^^xsd:string .
NLXSUB:20090505 a owl:Class ;
rdfs:label "Encapsulated nerve ending"^^xsd:string ;
skos:definition "Nerve ending found in skin surrounded by layers of connective tissue."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090506 a owl:Class ;
rdfs:label "Axon bundle"^^xsd:string ;
NIFRID:synonym "Axon projection"^^xsd:string ;
skos:definition "Group of myelinated or unmyelinated axons that group together."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:hasFormerParentClass SAO:3826089237 .
NLXSUB:20090507 a owl:Class ;
rdfs:label "Ipsilateral associatioinal commissural projection"^^xsd:string ;
NIFRID:synonym "Ipsilateral associational-commissural projection"^^xsd:string ;
skos:definition "Group of axons that arises from cells in the dentate gyrus polymorphic layer that terminate on the spines of granule cell dendrites on both the ipsilateral and contralateral sides."^^xsd:string ;
rdfs:subClassOf NLXSUB:20090506 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:definingCitation "Shepherd, G. M. The synaptic organization of the brain, 5th ed New York: Oxford University Press, 2005"^^xsd:string .
NLXSUB:20090508 a owl:Class ;
rdfs:label "Perforant path"^^xsd:string ;
skos:definition "Axons arising from multipolar neurons in the entorhinal cortex projecting to the hippocampal formation. The fibers penetrate the hippocampal sulcus to terminate in the dentate gyrus and also project to area CA1 and the subiculum."^^xsd:string ;
rdfs:subClassOf NLXSUB:20090506 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090509 a owl:Class ;
rdfs:label "Schaffer collaterals"^^xsd:string ;
skos:definition "Group of axons arising from hippocampal CA3 pyramidal neurons projecting to area CA1."^^xsd:string ;
rdfs:subClassOf NLXSUB:20090506 ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090510 a owl:Class ;
rdfs:label "Regional Part Of Pyramidal cell axon"^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
NIFRID:createdDate "May 19, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090511 a owl:Class ;
rdfs:label "Schaffer collateral"^^xsd:string ;
skos:definition "Part of axon of the CA3 pyramidal neuron that projects to hippocampal area CA1 ."^^xsd:string ;
rdfs:subClassOf NLXSUB:20090510,
[ a owl:Restriction ;
owl:onProperty NIFRID:proper_part_of ;
owl:someValuesFrom NLXSUB:20090509 ] ;
NIFRID:createdDate "May 19, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090512 a owl:Class ;
rdfs:label "Motor endplate"^^xsd:string ;
skos:definition "Terminal ending of the axon of a motor neuron that forms a synapse onto a muscle cell."^^xsd:string ;
rdfs:subClassOf SAO:187426937,
[ a owl:Restriction ;
owl:onProperty NIFRID:proper_part_of ;
owl:someValuesFrom SAO:1124888485 ] ;
NIFRID:createdDate "May 19, 2009"^^xsd:string ;
NIFRID:modifiedDate "February 23, 2010"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090513 a owl:Class ;
rdfs:label "Extracellular matrix"^^xsd:string ;
skos:definition "A system of insoluble protein fibrils and soluble complexes composed of carbohydrate polymers linked to protein molecules, i.e. proteoglycans, in the extracellular space. Insoluble protein fibrils are mainly of two types: collagen and elastin; the soluble polymers consist of long carbohydrate chains, linked to proteins."^^xsd:string ;
rdfs:subClassOf SAO:9117790637 ;
rdfs:comment "Fmaid: 9672"^^xsd:string ;
NIFRID:createdDate "May 17, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string .
NLXSUB:20090601 a owl:Class ;
rdfs:label "Dentate gyrus mossy fiber"^^xsd:string ;
NIFRID:synonym "Granule cell axons"^^xsd:string ;
skos:definition "The granule cells give rise to distinctive unmyelinated axons referred to as mossy fibers by Ramón y Cajal."^^xsd:string ;
rdfs:subClassOf SAO:1770195789 ;
NIFRID:createdDate "June 18, 2009"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:definingCitation "The dentate gyrus: fundamental neuroanatomical organization (dentate gyrus for dummies) by David G. Amaral, Helen E. Scharfman, and Pierre Lavenex"^^xsd:string ;
NIFRID:definingCitationID "PMID PMC2492885"^^xsd:string ;
NIFRID:PMID "PMC2492885"^^xsd:string .
NLXSUB:20090701 a owl:Class ;
rdfs:label "Early Endosome"^^xsd:string ;
skos:definition "Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered (GO: 0005769)."^^xsd:string ;
rdfs:subClassOf SAO:1720343330 ;
NIFRID:createdDate "July 14, 2009"^^xsd:string .
NLXSUB:20090702 a owl:Class ;
rdfs:label "Late Endosome"^^xsd:string ;
skos:definition "Late endosomes are vesicular structures that accumulate internalized components after their passage through early endosomes (GO: 0005700)."^^xsd:string ;
rdfs:subClassOf SAO:1720343330 ;
NIFRID:createdDate "July 14, 2009"^^xsd:string ;
NIFRID:definingCitation "Masa H. Sato, Ryosuke L Ohniwa, and Tomohiro Uemura, SNAREs in Plant Endocytosis and the Post-Golgi Traffic, Plant Cell Monogr, September 2005, DOI: 10.1007/7089 012"^^xsd:string .
NLXSUB:20090703 a owl:Class ;
rdfs:label "Glial Cytoplasmic Inclusion"^^xsd:string ;
skos:prefLabel "Glial Cytoplasmic Inclusion"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:createdDate "July 14, 2009"^^xsd:string .
SAO:9456487 a owl:Class ;
rdfs:label "Trans Golgi Network"^^xsd:string ;
skos:prefLabel "Trans Golgi Network"^^xsd:string ;
skos:definition "A network of membrane compartments, located at the cytoplasmic side of the golgi apparatus, where proteins and lipids are sorted for transport to various locations in the cell or cell membrane (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:1546288504 ;
NIFRID:gene_Ontology_ID "0005802"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9456487"^^xsd:string ;
NIFRID:umls_ID "C0887838"^^xsd:string .
SAO:11978067 a owl:Class ;
rdfs:label "Basal Body"^^xsd:string ;
skos:prefLabel "Basal Body"^^xsd:string ;
skos:definition "A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:120573470,
SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1397492660,
SAO:1539965131,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:gene_Ontology_ID "0005932"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao11978067"^^xsd:string ;
NIFRID:umls_ID "C0230744"^^xsd:string ;
skos:example .
SAO:18239917 a owl:Class ;
rdfs:label "Axonal Spine"^^xsd:string ;
skos:prefLabel "Axonal Spine"^^xsd:string ;
skos:definition "Refers to spine that originates from the axon, usually the initial segment (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1145756102 ;
owl:disjointWith SAO:2048514053 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao18239917"^^xsd:string .
SAO:18461326 a owl:Class ;
rdfs:label "Inner Bounding Mitochondrial Membrane"^^xsd:string ;
skos:prefLabel "Inner Bounding Mitochondrial Membrane"^^xsd:string ;
skos:definition "Part of mitochondrial inner membrane that runs parallel to the outer mitochondrial membrane"^^xsd:string ;
rdfs:subClassOf SAO:1686050947 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao18461326"^^xsd:string .
SAO:26622963 a owl:Class ;
rdfs:label "Protein"^^xsd:string ;
skos:prefLabel "Protein"^^xsd:string ;
rdfs:comment "This class classifies fine under 'Macromolecule' while loaded with NIF-Molecule.owl module."^^xsd:string ;
NIFRID:modifiedDate "March 18, 2009"^^xsd:string ;
NIFRID:hasCurationStatus "uncurated"^^xsd:string ;
NIFRID:hasFormerParentClass SAO:500241072 ;
NIFRID:sao_ID "sao26622963"^^xsd:string .
SAO:28175134 a owl:Class ;
rdfs:label "Terminal Specialization"^^xsd:string ;
skos:prefLabel "Terminal Specialization"^^xsd:string ;
rdfs:subClassOf SAO:420754792 ;
owl:disjointWith SAO:884265541 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao28175134"^^xsd:string .
SAO:82111036 a owl:Class ;
rdfs:label "Cell Protrusion"^^xsd:string ;
skos:prefLabel "Cell Protrusion"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:864921383,
SAO:895885284 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-82111036"^^xsd:string .
SAO:95019936 a owl:Class ;
rdfs:label "Centriole"^^xsd:string ;
skos:prefLabel "Centriole"^^xsd:string ;
skos:definition "A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1456184038 ;
NIFRID:gene_Ontology_ID "0005814"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao95019936"^^xsd:string ;
NIFRID:umls_ID "C0007708"^^xsd:string ;
skos:example .
SAO:101633890 a owl:Class ;
rdfs:label "Cytosol"^^xsd:string ;
skos:prefLabel "Cytosol"^^xsd:string ;
skos:definition "The part of the cytoplasm that does not contain membranous or particulate subcellular components (UMLS)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:11978067,
SAO:120573470,
SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1081228141,
SAO:1231384859,
SAO:1397492660,
SAO:1539965131,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839 ;
NIFRID:gene_Ontology_ID "0005829"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao101633890"^^xsd:string ;
NIFRID:umls_ID "C0010854"^^xsd:string .
SAO:109906988 a owl:Class ;
rdfs:label "Pinceau Fiber"^^xsd:string ;
skos:prefLabel "Pinceau Fiber"^^xsd:string ;
skos:definition "Dense plexus formed by the descending collaterals of cerebellar basket cells tha wrap around the Purkinje cell axonal initial segment."^^xsd:string ;
rdfs:subClassOf SAO:1586851177 ;
owl:disjointWith SAO:413722576 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao109906988"^^xsd:string .
SAO:110773650 a owl:Class ;
rdfs:label "Dendritic Microtubule"^^xsd:string ;
skos:prefLabel "Dendritic Microtubule"^^xsd:string ;
rdfs:subClassOf SAO:1846835077 ;
owl:disjointWith SAO:248349196,
SAO:1872343973 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao110773650"^^xsd:string .
SAO:113580911 a owl:Class ;
rdfs:label "Regional Part Of Nucleolus"^^xsd:string ;
skos:prefLabel "Regional Part Of Nucleolus"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
owl:disjointWith SAO:1546288504,
SAO:1682692988,
SAO:1686050947,
SAO:2019617624 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao113580911"^^xsd:string .
SAO:118541872 a owl:Class ;
rdfs:label "Gap Junction"^^xsd:string ;
skos:prefLabel "Gap Junction"^^xsd:string ;
skos:definition "Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
owl:disjointWith SAO:427941916,
SAO:946766835,
SAO:1400623473,
SAO:1939999134,
SAO:1956738165 ;
NIFRID:gene_Ontology_ID "0005921"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao118541872"^^xsd:string ;
NIFRID:umls_ID "C0206117"^^xsd:string ;
skos:example .
SAO:118944228 a owl:Class ;
rdfs:label "Mitochondrial Intermembrane Space"^^xsd:string ;
skos:prefLabel "Mitochondrial Intermembrane Space"^^xsd:string ;
skos:definition "The region between the inner and outer lipid bilayers of the mitochondrial envelope. (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:343550527 ;
owl:disjointWith SAO:508958414,
SAO:1899375636 ;
rdfs:comment "I'm having difficulty deciding whether this is a regional part of a mitochondrion or whether it is a site; today it is a regional part."^^xsd:string ;
NIFRID:gene_Ontology_ID "0005758"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao118944228"^^xsd:string ;
NIFRID:umls_ID "C1166886"^^xsd:string .
SAO:120573470 a owl:Class ;
rdfs:label "Cellular Inclusion"^^xsd:string ;
skos:prefLabel "Cellular Inclusion"^^xsd:string ;
NIFRID:synonym "Inclusion Body"^^xsd:string ;
skos:definition "A nuclear or cytoplasmic aggregate of stainable substances, usually proteins."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1231384859,
SAO:1397492660,
SAO:1539965131,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao120573470"^^xsd:string .
SAO:120818728 a owl:Class ;
rdfs:label "Lumenal Surface"^^xsd:string ;
skos:prefLabel "Lumenal Surface"^^xsd:string ;
rdfs:subClassOf SAO:1329750433 ;
owl:disjointWith SAO:1514682949,
SAO:2135015805 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao120818728"^^xsd:string .
SAO:124393998 a owl:Class ;
rdfs:label "Endoplasmic Reticulum Exit Site"^^xsd:string ;
skos:prefLabel "Endoplasmic Reticulum Exit Site"^^xsd:string ;
skos:definition "Specialized ribosome-free subdomains of synthetic endoplasmic reticulum where cargo is concentrated into vesicles tha bud from the endoplasmic reticulum for tranport to the Golgi (Horton and Ehlers, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:2019617624 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao124393998"^^xsd:string .
SAO:128470897 a owl:Class ;
rdfs:label "Sub-surface Cisternae"^^xsd:string ;
skos:prefLabel "Sub-surface Cisternae"^^xsd:string ;
skos:definition "Specialization of the hypolemmal cisterna consisting of either single profiles or closely apposed stacks of ER in which the lumen is obliterated, lying 10-20 nm beneath the plasma membrane (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1634374950 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao128470897"^^xsd:string ;
skos:example .
SAO:138219748 a owl:Class ;
rdfs:label "Vesicular Component"^^xsd:string ;
skos:prefLabel "Vesicular Component"^^xsd:string ;
rdfs:subClassOf SAO:1546288504 ;
owl:disjointWith SAO:9456487,
SAO:632188024 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao138219748"^^xsd:string .
SAO:138430598 a owl:Class ;
rdfs:label "Nematosome"^^xsd:string ;
skos:prefLabel "Nematosome"^^xsd:string ;
skos:definition "Cellular inclusions found in cytoplasm that resemble nuclioli and stain with basophilic stains. They are ball-like structures about .9 microns in diameter and lack a limiting membrane. Structurally, they are composed of tightly packed fine filaments attached to them by means of fine filaments that radiate from their periphery. They were first discribed by Grillo in 1970. (from Peters, Palay, Webster)"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao138430598"^^xsd:string .
SAO:172297168 a owl:Class ;
rdfs:label "Dendritic Tree"^^xsd:string ;
skos:prefLabel "Dendritic Tree"^^xsd:string ;
skos:definition "The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches."^^xsd:string ;
rdfs:subClassOf SAO:1970895398 ;
owl:disjointWith SAO:2128156969 ;
NIFRID:bonfireID "BF_C000102"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao172297168"^^xsd:string .
SAO:180601769 a owl:Class ;
rdfs:label "Cytoplasmic Vesicle"^^xsd:string ;
skos:prefLabel "Cytoplasmic Vesicle"^^xsd:string ;
skos:definition "A vesicle formed of membrane or protein, found in the cytoplasm of a cell (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:221389602 ;
NIFRID:gene_Ontology_ID "0031410"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao180601769"^^xsd:string .
SAO:181458425 a owl:Class ;
rdfs:label "Glial Limiting Endfoot"^^xsd:string ;
skos:prefLabel "Glial Limiting Endfoot"^^xsd:string ;
skos:definition "Process of astrocyte that extends to the surface of the central nervous system. Together, they form the glial limiting membrane or glial limitans."^^xsd:string ;
rdfs:subClassOf SAO:388182739 ;
owl:disjointWith SAO:2048701763 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao181458425"^^xsd:string .
SAO:183270081 a owl:Class ;
rdfs:label "Subregional Part Of Neuron Process"^^xsd:string ;
skos:prefLabel "Subregional Part Of Neuron Process"^^xsd:string ;
skos:definition "Subcompartment of a compartment."^^xsd:string ;
rdfs:subClassOf SAO:420949334 ;
owl:disjointWith SAO:280355188,
SAO:420754792 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao183270081"^^xsd:string .
SAO:187426937 a owl:Class ;
rdfs:label "Synaptic Bouton"^^xsd:string ;
skos:prefLabel "Synaptic Bouton"^^xsd:string ;
skos:definition "Terminal pre-synaptic ending of an axon or axon collateral."^^xsd:string ;
rdfs:subClassOf SAO:2007137787 ;
owl:disjointWith SAO:488120195 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao187426937"^^xsd:string ;
skos:example .
SAO:188049490 a owl:Class ;
rdfs:label "Node Of Ranvier Axon"^^xsd:string ;
skos:prefLabel "Node Of Ranvier Axon"^^xsd:string ;
skos:definition "Part of axon located at the gaps between adjacent myelin sheaths characterized by a slightly larger diameter than paranodal axon and the presence of a dense coating on the axolemma."^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:830092290,
SAO:936144858 ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:1791490892 ;
NIFRID:sao_ID "sao-188049490"^^xsd:string .
SAO:195217619 a owl:Class ;
rdfs:label "Regional Part Of Schwann Cell"^^xsd:string ;
skos:prefLabel "Regional Part Of Schwann Cell"^^xsd:string ;
rdfs:subClassOf SAO:895885284 ;
owl:disjointWith SAO:685712019,
SAO:831502550 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao195217619"^^xsd:string .
SAO:203987954 a owl:Class ;
rdfs:label "Axonal Growth Cone"^^xsd:string ;
skos:prefLabel "Axonal Growth Cone"^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:256000789,
SAO:627227260 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao203987954"^^xsd:string .
SAO:205380252 a owl:Class ;
rdfs:label "Neuropil"^^xsd:string ;
skos:prefLabel "Neuropil"^^xsd:string ;
skos:definition "A dense intricate feltwork of interwoven fine glial processes, fibrils, synaptic terminals, axons, and dendrites interspersed among the nerve cells in the gray matter of the central nervous system (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
owl:disjointWith SAO:732341560 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao205380252"^^xsd:string ;
NIFRID:umls_ID "C0228081"^^xsd:string ;
skos:example .
SAO:206157942 a owl:Class ;
rdfs:label "Internode"^^xsd:string ;
skos:prefLabel "Internode"^^xsd:string ;
skos:definition "Part of nodal complex located underneath the compact myelin in between nodes of Ranvier"^^xsd:string ;
rdfs:subClassOf SAO:596411490 ;
NIFRID:sao_ID "sao-206157942"^^xsd:string .
SAO:220861693 a owl:Class ;
rdfs:label "Nuclear Pore"^^xsd:string ;
skos:prefLabel "Nuclear Pore"^^xsd:string ;
skos:definition "Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:505137457,
SAO:661522542 ;
NIFRID:gene_Ontology_ID "0005643"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao220861693"^^xsd:string ;
NIFRID:umls_ID "C0028587"^^xsd:string ;
skos:example ,
.
SAO:221389602 a owl:Class ;
rdfs:label "Vesicle"^^xsd:string ;
skos:prefLabel "Vesicle"^^xsd:string ;
skos:definition "Any small, fluid-filled, spherical organelle enclosed by membrane or protein (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606 ;
NIFRID:gene_Ontology_ID "0031982"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao221389602"^^xsd:string ;
NIFRID:umls_ID "C0042219"^^xsd:string .
SAO:234066064 a owl:Class ;
rdfs:label "Paranode"^^xsd:string ;
skos:prefLabel "Paranode"^^xsd:string ;
skos:definition "Region of nodal complex adjacent to the nodal region"^^xsd:string ;
rdfs:subClassOf SAO:596411490 ;
NIFRID:sao_ID "sao-234066064"^^xsd:string .
SAO:243541954 a owl:Class ;
rdfs:label "Synaptic Cleft"^^xsd:string ;
skos:prefLabel "Synaptic Cleft"^^xsd:string ;
skos:definition "The narrow gap that separates the presynaptic and postsynaptic membranes, into which a neurotransmitter is released (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1425028079 ;
NIFRID:gene_Ontology_ID "0043083"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao243541954"^^xsd:string ;
NIFRID:umls_ID "C0682685"^^xsd:string ;
skos:example ,
.
SAO:248349196 a owl:Class ;
rdfs:label "Neurotubule"^^xsd:string ;
skos:prefLabel "Neurotubule"^^xsd:string ;
skos:definition "Refers to a microtubule found in a nerve cell. The term \"neurotubule\" may now be obselete; however, it was used in earlier findings."^^xsd:string ;
rdfs:subClassOf SAO:1846835077 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao248349196"^^xsd:string .
SAO:250772229 a owl:Class ;
rdfs:label "Axolemma"^^xsd:string ;
skos:prefLabel "Axolemma"^^xsd:string ;
skos:definition "The plasma membrane of an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1663586795 ;
NIFRID:gene_Ontology_ID "0030673"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao250772229"^^xsd:string .
SAO:250931889 a owl:Class ;
rdfs:label "Neuron Protrusion"^^xsd:string ;
skos:prefLabel "Neuron Protrusion"^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
owl:disjointWith SAO:420949334,
SAO:866168499,
SAO:867568886 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-250931889"^^xsd:string .
SAO:254777664 a owl:Class ;
rdfs:label "Schmidtt-Lanterman Cleft"^^xsd:string ;
skos:prefLabel "Schmidtt-Lanterman Cleft"^^xsd:string ;
skos:definition "From Reactime: Regions within compact myelin in which the cytoplasmic faces of the enveloping myelin sheath are not tightly juxtaposed, and include cytoplasm from the cell responsible for making the myelin. Schmidt-Lanterman clefts occur in the compact myelin internode, while lateral loops are analogous structures found in the paranodal region adjacent to the nodes of Ranvier."^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:343550527,
SAO:797538226,
SAO:927884761 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao254777664"^^xsd:string ;
skos:example .
SAO:256000789 a owl:Class ;
rdfs:label "Initial Segment"^^xsd:string ;
skos:prefLabel "Initial Segment"^^xsd:string ;
skos:definition "Portion of the axon proximal to the neuronal cell body, at the level of the axon hillock. The action potentials that propagate along the axon are generated at the level of this initial segment (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:627227260 ;
NIFRID:gene_Ontology_ID "0043194"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao256000789"^^xsd:string ;
skos:example ,
.
SAO:257629430 a owl:Class ;
rdfs:label "Puncta Adhaerentia"^^xsd:string ;
skos:prefLabel "Puncta Adhaerentia"^^xsd:string ;
skos:definition "A small version of the zonula adharens type junction, characterized by a symmetrical adherent point between two cells."^^xsd:string ;
rdfs:subClassOf SAO:1400623473 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao257629430"^^xsd:string ;
skos:example .
SAO:273773228 a owl:Class ;
rdfs:label "Apical Dendrite"^^xsd:string ;
skos:prefLabel "Apical Dendrite"^^xsd:string ;
rdfs:subClassOf SAO:1211023249 ;
NIFRID:bonfireID "BF_C000112"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao273773228"^^xsd:string .
SAO:280355188 a owl:Class ;
rdfs:label "Regional Part Of Axon"^^xsd:string ;
skos:prefLabel "Regional Part Of Axon"^^xsd:string ;
rdfs:subClassOf SAO:420949334 ;
owl:disjointWith SAO:420754792 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao280355188"^^xsd:string .
SAO:289211478 a owl:Class ;
rdfs:label "Chemical Synapse"^^xsd:string ;
skos:prefLabel "Chemical Synapse"^^xsd:string ;
rdfs:subClassOf SAO:914572699 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao289211478"^^xsd:string .
SAO:295057932 a owl:Class ;
rdfs:label "Dendriole"^^xsd:string ;
skos:prefLabel "Dendriole"^^xsd:string ;
rdfs:subClassOf SAO:28175134 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao295057932"^^xsd:string .
SAO:317384566 a owl:Class ;
rdfs:label "Stubby Dendritic Spine"^^xsd:string ;
skos:prefLabel "Stubby Dendritic Spine"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
owl:disjointWith SAO:876577163,
SAO:965204139 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao317384566"^^xsd:string ;
skos:example .
SAO:333328131 a owl:Class ;
rdfs:label "Cristae"^^xsd:string ;
skos:prefLabel "Cristae"^^xsd:string ;
skos:definition "Any of the inward folds of the mitochondrial inner membrane. (Gene Ontology)"^^xsd:string ;
rdfs:subClassOf SAO:1686050947 ;
NIFRID:gene_Ontology_ID "0030061"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao333328131"^^xsd:string ;
NIFRID:umls_ID "C0230844"^^xsd:string ;
skos:example .
SAO:340271629 a owl:Class ;
rdfs:label "Regional Part Of Cell"^^xsd:string ;
skos:prefLabel "Regional Part Of Cell"^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
rdfs:comment "Equivalent to \"regional part\" in the FMA--a primary partition that spatially subdivides an anatomical structure into sets of diverse constiutional parts that share a given location within the whole; i.d., the partition is spatial instead of compositional (Mejino JLV et al., 2003)."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao340271629"^^xsd:string .
SAO:343550527 a owl:Class ;
rdfs:label "Mitochondrial Space"^^xsd:string ;
skos:prefLabel "Mitochondrial Space"^^xsd:string ;
skos:definition "Spaces defined by the inner and outer mitochondrial membranes"^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:797538226,
SAO:927884761 ;
owl:disjointUnionOf (
SAO:118944228
SAO:508958414
SAO:1899375636 ) ;
NIFRID:sao_ID "sao-343550527"^^xsd:string .
SAO:386529203 a owl:Class ;
rdfs:label "Pre-synaptic Component"^^xsd:string ;
skos:prefLabel "Pre-synaptic Component"^^xsd:string ;
rdfs:subClassOf SAO:1784069613 ;
NIFRID:sao_ID "sao386529203"^^xsd:string .
SAO:388182739 a owl:Class ;
rdfs:label "Endfoot"^^xsd:string ;
skos:prefLabel "Endfoot"^^xsd:string ;
skos:definition "Terminal process of astrocyte abutting non-neuronal surfaces in the brain."^^xsd:string ;
rdfs:subClassOf SAO:1189060993 ;
NIFRID:hasCurationStatus "uncurated"^^xsd:string,
NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao388182739"^^xsd:string .
SAO:401910342 a owl:Class ;
rdfs:label "Somatic Portion"^^xsd:string ;
skos:prefLabel "Somatic Portion"^^xsd:string ;
skos:definition "Portion of the tanycyte that lies within the ependyma and contains the nucleus (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:877341397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao401910342"^^xsd:string .
SAO:403156667 a owl:Class ;
rdfs:label "Docked Vesicle"^^xsd:string ;
skos:prefLabel "Docked Vesicle"^^xsd:string ;
skos:definition "Synaptic vesicle docked at the pre-synaptic active zone."^^xsd:string ;
rdfs:subClassOf SAO:577473346 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao403156667"^^xsd:string .
SAO:413722576 a owl:Class ;
rdfs:label "Peri Cellular Basket"^^xsd:string ;
skos:prefLabel "Peri Cellular Basket"^^xsd:string ;
skos:definition "Ramification of basket cell axon surrounding cell bodies, forming the characteristic peri-cellular baskets from which the cell class derives its name."^^xsd:string ;
rdfs:subClassOf SAO:1586851177 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao413722576"^^xsd:string .
SAO:414196390 a owl:Class ;
rdfs:label "Membrane Bound Organelle"^^xsd:string ;
skos:prefLabel "Membrane Bound Organelle"^^xsd:string ;
skos:definition "Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1539965131 ;
NIFRID:gene_Ontology_ID "0043227"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao414196390"^^xsd:string .
SAO:420754792 a owl:Class ;
rdfs:label "Regional Part Of Dendrite"^^xsd:string ;
skos:prefLabel "Regional Part Of Dendrite"^^xsd:string ;
rdfs:subClassOf SAO:420949334 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao420754792"^^xsd:string .
SAO:420949334 a owl:Class ;
rdfs:label "Regional Part Of Neuron Process"^^xsd:string ;
skos:prefLabel "Regional Part Of Neuron Process"^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
owl:disjointWith SAO:866168499,
SAO:867568886 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-420949334"^^xsd:string .
SAO:427941916 a owl:Class ;
rdfs:label "Septate Junction"^^xsd:string ;
skos:prefLabel "Septate Junction"^^xsd:string ;
skos:definition "An intercellular junction found in invertebrate epithelia that is characterised by a ladder like appearance in electron micrographs. Thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space. Occur widely in transporting epithelia and are controversially considered analogous to tight junctions (zonula occludens) Biology-online.org"^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
owl:disjointWith SAO:946766835 ;
NIFRID:gene_Ontology_ID "0005918"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao427941916"^^xsd:string .
SAO:445019788 a owl:Class ;
rdfs:label "Connexon"^^xsd:string ;
skos:prefLabel "Connexon"^^xsd:string ;
NIFRID:synonym "hemichannel, connexon complex"^^xsd:string ;
skos:definition "Assembly of 6 connexins into a hemichannel that forms one half of a gap junction. In some cells, the hemichannel is active as a conduit between the cytoplasm and the extracellular space."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
NIFRID:gene_Ontology_ID "0005922"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasDefinitionSource NIFRID:Wikipedia_defSource ;
NIFRID:sao_ID "sao445019788"^^xsd:string ;
NIFRID:umls_ID "C0230609"^^xsd:string .
SAO:445485807 a owl:Class ;
rdfs:label "Extended Chromatin"^^xsd:string ;
skos:prefLabel "Extended Chromatin"^^xsd:string ;
NIFRID:synonym "euchromatin"^^xsd:string ;
skos:definition "A dispersed and relatively uncompacted form of chromatin (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1615953555 ;
owl:disjointWith SAO:581845896 ;
NIFRID:gene_Ontology_ID "0000791"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao445485807"^^xsd:string .
SAO:447856407 a owl:Class ;
rdfs:label "Contact Site"^^xsd:string ;
skos:prefLabel "Contact Site"^^xsd:string ;
skos:definition "Sites of close apposition of the inner and outer mitochondrial membrane (Perkins and Frey, 2000)."^^xsd:string ;
rdfs:subClassOf SAO:1367457321 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao447856407"^^xsd:string .
SAO:451912436 a owl:Class ;
rdfs:label "Golgi Apparatus"^^xsd:string ;
skos:prefLabel "Golgi Apparatus"^^xsd:string ;
NIFRID:synonym "golgi cisternae"^^xsd:string ;
skos:definition "A stack of flattened vesicles that functions in posttranslational processing and sorting of proteins, receiving them from the RER and directing them to secretory vesicles, lysosomes, or the cell membrane. The movement of proteins takes place by transfer vesicles that bud off from the rough endoplasmic reticulum or Golgi apparatus and fuse with the Golgi, lysosomes or cell membrane. (From Glick, Glossary of Biochemistry and Molecular Biology, 1990) (MSH)"^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:499555322,
SAO:585356902,
SAO:725931194 ;
NIFRID:gene_Ontology_ID "0005794"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao451912436"^^xsd:string ;
NIFRID:umls_ID "C0018042"^^xsd:string ;
skos:example .
SAO:452970150 a owl:Class ;
owl:deprecated true ;
rdfs:label "Membrane Receptor"^^xsd:string ;
skos:prefLabel "Membrane Receptor"^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:externalSourceURI "umls_ID: C0230664"^^xsd:string .
SAO:478230652 a owl:Class ;
rdfs:label "Granular Vesicle"^^xsd:string ;
skos:prefLabel "Granular Vesicle"^^xsd:string ;
skos:definition "Vesicle of varying size, but usually larger than 45 nm, that has an electron dense \"granular\" core, associated with noradrenergic and peptidergic cells."^^xsd:string ;
rdfs:subClassOf SAO:180601769 ;
owl:disjointWith SAO:577473346,
SAO:885490876 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao478230652"^^xsd:string .
SAO:488120195 a owl:Class ;
rdfs:label "Calyx"^^xsd:string ;
skos:prefLabel "Calyx"^^xsd:string ;
rdfs:subClassOf SAO:2007137787 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao488120195"^^xsd:string .
SAO:494258938 a owl:Class ;
rdfs:label "Active Zone Dense Projection"^^xsd:string ;
skos:prefLabel "Active Zone Dense Projection"^^xsd:string ;
skos:definition "Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered (Zhai and Bellen, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:1911631652 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao494258938"^^xsd:string .
SAO:499555322 a owl:Class ;
rdfs:label "Peroxisome"^^xsd:string ;
skos:prefLabel "Peroxisome"^^xsd:string ;
skos:definition "A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) (Gene Ontology)."^^xsd:string,
"Resembles lysosomes in appearance (Peters, Palay and Webster, 1991). According to the latter, peroxisome is synonymous with microbodies."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:585356902,
SAO:725931194 ;
NIFRID:gene_Ontology_ID "0005777"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao499555322"^^xsd:string ;
NIFRID:umls_ID "C0752063"^^xsd:string .
SAO:505137457 a owl:Class ;
rdfs:label "Nuclear Body"^^xsd:string ;
skos:prefLabel "Nuclear Body"^^xsd:string ;
skos:definition "Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:661522542 ;
NIFRID:gene_Ontology_ID "0016604"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao505137457"^^xsd:string ;
NIFRID:umls_ID "C0230595"^^xsd:string .
SAO:506721981 a owl:Class ;
rdfs:label "Laminated Body"^^xsd:string ;
skos:prefLabel "Laminated Body"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao506721981"^^xsd:string .
SAO:508165343 a owl:Class ;
rdfs:label "Supra Cellular Structure"^^xsd:string ;
skos:prefLabel "Supra Cellular Structure"^^xsd:string ;
NIFRID:synonym "Supracellular Structure"^^xsd:string ;
skos:definition "A morphological or functional domain formed by parts of two or more cells, e.g., neuropil, dendritic bundles."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
owl:disjointWith SAO:991156472 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao508165343"^^xsd:string .
SAO:508958414 a owl:Class ;
rdfs:label "Intracristal Space"^^xsd:string ;
skos:prefLabel "Intracristal Space"^^xsd:string ;
skos:definition "The space bounded by the cristae membrane"^^xsd:string ;
rdfs:subClassOf SAO:343550527 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao508958414"^^xsd:string .
SAO:517367952 a owl:Class ;
rdfs:label "Endocytic Zone"^^xsd:string ;
skos:prefLabel "Endocytic Zone"^^xsd:string ;
skos:definition "Region of the spine within several hundred nanometers of the post synaptic specialization characterized by the presence of coated pits. It is believed that this zone may be specialized for endocytosis. These coated pits are never observed in membrane associated with the post synaptic specialization (Blanpied and Ehlers, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:553711217 ;
NIFRID:sao_ID "sao517367952"^^xsd:string .
SAO:553711217 a owl:Class ;
rdfs:label "Spine Related Site"^^xsd:string ;
skos:prefLabel "Spine Related Site"^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:596411490 ;
NIFRID:sao_ID "sao553711217"^^xsd:string .
SAO:553737851 a owl:Class ;
rdfs:label "Spinule"^^xsd:string ;
skos:prefLabel "Spinule"^^xsd:string ;
rdfs:subClassOf SAO:866168499 ;
owl:disjointWith SAO:952643730 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao553737851"^^xsd:string ;
skos:example .
SAO:561419532 a owl:Class ;
rdfs:label "Golgi Lamellae"^^xsd:string ;
skos:prefLabel "Golgi Lamellae"^^xsd:string ;
rdfs:subClassOf SAO:624292949 ;
owl:disjointWith SAO:819927218 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao561419532"^^xsd:string .
SAO:571652273 a owl:Class ;
owl:deprecated true ;
rdfs:label "Node Of Ranvier"^^xsd:string ;
skos:prefLabel "Node Of Ranvier"^^xsd:string ;
skos:definition "Site located at the gaps in the myelin sheaths of myelinated axons. Axon diameter is generally decreased in the nodal region, compared to the internode. Ranvier's nodes allow saltatory conduction, that is, jumping of impulses from node to node, which is faster and more energetically favorable than continuous conduction (MSH)."^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
rdfs:comment "This class has been retired."^^xsd:string ;
NIFRID:modifiedDate "May 16, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:isReplacedByClass BIRNLEX:1152_2 ;
NIFRID:sao_ID "sao571652273"^^xsd:string ;
NIFRID:umls_ID "C0034667"^^xsd:string .
SAO:577473346 a owl:Class ;
rdfs:label "Vesicle Other"^^xsd:string ;
skos:prefLabel "Vesicle Other"^^xsd:string ;
skos:definition "Category for vesicles observed in electron micrographs with unknown function."^^xsd:string ;
rdfs:subClassOf SAO:180601769 ;
owl:disjointWith SAO:885490876 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao577473346"^^xsd:string .
SAO:581845896 a owl:Class ;
rdfs:label "Condensed Chromatin"^^xsd:string ;
skos:prefLabel "Condensed Chromatin"^^xsd:string ;
NIFRID:synonym "heterochromatin"^^xsd:string ;
skos:definition "A compact and highly condensed form of chromatin (Gene Ontology)."^^xsd:string,
"Chromatin that are agglomerated into irregular masses, some attached to the nuclear envelope."^^xsd:string ;
rdfs:subClassOf SAO:1615953555 ;
NIFRID:gene_Ontology_ID "0000792"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao581845896"^^xsd:string .
SAO:585356902 a owl:Class ;
rdfs:label "Lysosome"^^xsd:string ;
skos:prefLabel "Lysosome"^^xsd:string ;
skos:definition "Any of a group of related cytoplasmic, membrane bound organelles that are found in most animal cells and that contain a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:725931194 ;
NIFRID:gene_Ontology_ID "0005764"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao585356902"^^xsd:string ;
NIFRID:umls_ID "C0024369"^^xsd:string .
SAO:587592318 a owl:Class ;
rdfs:label "Neurotransmitter receptor role"^^xsd:string ;
skos:prefLabel "Neurotransmitter Receptor Role"^^xsd:string ;
skos:definition "Cell surface receptors that bind signalling molecules released by neurons and convert these signals into intracellular changes influencing the behavior of cells. Neurotransmitter is used here in its most general sense, including not only messengers that act to regulate ion channels, but also those which act on second messenger systems and those which may act at a distance from their release sites. Included are receptors for neuromodulators, neuroregulators, neuromediators, and neurohumors, whether or not located at synapses (MSH)."^^xsd:string ;
rdfs:subClassOf BFO:0000023 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao587592318"^^xsd:string ;
NIFRID:umls_ID "C0034828"^^xsd:string .
SAO:587858733 a owl:Class ;
rdfs:label "Glomerulus"^^xsd:string ;
skos:prefLabel "Glomerulus"^^xsd:string ;
skos:definition "Large synaptic bouton found in areas like olfactory bulb, cerebellar cortex and thalamus, that contacts many post-synaptic targets. http://ccdb.ucsd.edu/SAO/images/glomerulus_sw_512x512.jpg"^^xsd:string,
"Type of neuropil characterized by a large synaptic bouton that contacts many post-synaptic targets found in areas like olfactory bulb, cerebellar cortex and thalamus."^^xsd:string ;
rdfs:subClassOf SAO:205380252 ;
rdfs:comment "I'm not sure whether this should be a type of neuropil or a type of synaptic complex. (Maryann Martone)"^^xsd:string ;
NIFRID:modifiedDate "June 22, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao587858733"^^xsd:string .
SAO:593830697 a owl:Class ;
rdfs:label "Schwann Cell Myelin Sheath"^^xsd:string ;
skos:prefLabel "Schwann Cell Myelin Sheath"^^xsd:string ;
skos:definition "An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-593830697"^^xsd:string ;
skos:example .
SAO:596411490 a owl:Class ;
rdfs:label "Node Related Site"^^xsd:string ;
skos:prefLabel "Node Related Site"^^xsd:string ;
skos:definition "Site defined with respect to the Node of Ranvier, e.g., node, paranode, juxtaparanode"^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
NIFRID:sao_ID "sao-596411490"^^xsd:string .
SAO:601362597 a owl:Class ;
rdfs:label "Lewy Neurite"^^xsd:string ;
skos:prefLabel "Lewy Neurite"^^xsd:string ;
skos:definition "Elongated neuronal process, described in brains of patients with Parkinson's disease, many of which exhibit side branches and have more than one branching point. Stains positively for ubiquitin in brainstem and forebrain regions affected in Parkinson's disease."^^xsd:string ;
rdfs:subClassOf SAO:867568886 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao601362597"^^xsd:string .
SAO:624292949 a owl:Class ;
rdfs:label "Golgi Subcomponent"^^xsd:string ;
skos:prefLabel "Golgi Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao624292949"^^xsd:string .
SAO:627227260 a owl:Class ;
rdfs:label "Axon Hillock"^^xsd:string ;
skos:prefLabel "Axon Hillock"^^xsd:string ;
skos:definition "Cone shaped elevation from which the axon originates; in Nissl stained preparations, the axon hillock usually can be identified as a region of the perikaryon that is distinguished by a deficiency of Nissl substance (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
NIFRID:gene_Ontology_ID "0043203"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao627227260"^^xsd:string ;
NIFRID:umls_ID "C0228079"^^xsd:string .
SAO:628508602 a owl:Class ;
rdfs:label "Cellular Subcomponent"^^xsd:string ;
skos:prefLabel "Cellular Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:730872736,
SAO:787716553,
SAO:830981606 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao628508602"^^xsd:string .
SAO:632188024 a owl:Class ;
rdfs:label "Cis Face"^^xsd:string ;
skos:prefLabel "Cis Face"^^xsd:string ;
rdfs:subClassOf SAO:1546288504 ;
owl:disjointWith SAO:9456487 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao632188024"^^xsd:string .
SAO:661522542 a owl:Class ;
rdfs:label "Nucleoplasm"^^xsd:string ;
skos:prefLabel "Nucleoplasm"^^xsd:string ;
skos:definition "That part of the nuclear content other than the chromosomes or the nucleolus (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
NIFRID:gene_Ontology_ID "0005654"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao661522542"^^xsd:string ;
NIFRID:umls_ID "C0682537"^^xsd:string .
SAO:666410040 a owl:Class ;
rdfs:label "Mitochondrial Subcomponent"^^xsd:string ;
skos:prefLabel "Mitochondrial Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao666410040"^^xsd:string .
SAO:671419673 a owl:Class ;
rdfs:label "Microvilli"^^xsd:string ;
skos:prefLabel "Microvilli"^^xsd:string ;
rdfs:subClassOf SAO:1974433376 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao671419673"^^xsd:string ;
skos:example ,
.
SAO:685712019 a owl:Class ;
rdfs:label "Regional Part Of Astrocyte"^^xsd:string ;
skos:prefLabel "Regional Part Of Astrocyte"^^xsd:string ;
rdfs:subClassOf SAO:895885284 ;
owl:disjointWith SAO:831502550 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao685712019"^^xsd:string .
SAO:694815499 a owl:Class ;
rdfs:label "Coated Tip"^^xsd:string ;
skos:prefLabel "Coated Tip"^^xsd:string ;
skos:definition "Coated tips of tubular endosomes that appear to be vesicles in the process of budding off (Clooney et al., 2002)."^^xsd:string ;
rdfs:subClassOf SAO:1683772610 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao694815499"^^xsd:string .
SAO:699412220 a owl:Class ;
rdfs:label "Regional Part Of SER"^^xsd:string ;
skos:prefLabel "Regional Part Of SER"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-699412220"^^xsd:string .
SAO:700839054 a owl:Class ;
rdfs:label "Gap Junction Plaque"^^xsd:string ;
skos:prefLabel "Gap Junction Plaque"^^xsd:string ;
skos:definition "An intercellular junction recognized in electron micrographs as a 7 layered structure with 4 dense lines, two from each of the plasma membranes, alternating with 3 lighter lines. The plaque is composed of multiple intercellular gap junction channels."^^xsd:string ;
rdfs:subClassOf SAO:1395777368 ;
owl:disjointWith SAO:914572699 ;
rdfs:comment "Need to determine what is the proper relationships between an electrotonic synapse and a gap junction"^^xsd:string ;
NIFRID:sao_ID "sao700839054"^^xsd:string .
SAO:707332678 a owl:Class ;
rdfs:label "Axon Microtubule Fascicle"^^xsd:string ;
skos:prefLabel "Axon Microtubule Fascicle"^^xsd:string ;
skos:definition "Refers to the bundled configuration of microtubules in the axon hillock and initial segment."^^xsd:string ;
rdfs:subClassOf SAO:1872343973 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao707332678"^^xsd:string .
SAO:710427438 a owl:Class ;
rdfs:label "Smooth Endoplasmic Reticulum"^^xsd:string ;
skos:prefLabel "Smooth Endoplasmic Reticulum"^^xsd:string ;
skos:definition "The smooth ER has no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1036339110 ;
NIFRID:gene_Ontology_ID "0005790"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao710427438"^^xsd:string ;
NIFRID:umls_ID "C0230789"^^xsd:string ;
skos:example .
SAO:725931194 a owl:Class ;
rdfs:label "Spine Apparatus"^^xsd:string ;
skos:prefLabel "Spine Apparatus"^^xsd:string ;
skos:definition "A specialization of the endomembrane system found in some classes of spines consisting of two or more closely apposed lamellae with interspersed dense material."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao725931194"^^xsd:string ;
NIFRID:umls_ID "C0230810"^^xsd:string ;
skos:example ,
.
SAO:730872736 a owl:Class ;
rdfs:label "Dense Body"^^xsd:string ;
skos:prefLabel "Dense Body"^^xsd:string ;
skos:definition "An electron dense body, some of which contain granules (Peters, Palay and Webster (1991)"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:787716553,
SAO:830981606 ;
rdfs:comment "Not clear if this should be described as an organelle or an inclusion."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao730872736"^^xsd:string .
SAO:732341560 a owl:Class ;
rdfs:label "Pinceau"^^xsd:string ;
skos:prefLabel "Pinceau"^^xsd:string ;
skos:definition "Supracellular structure formed by the descending axon collaterals of several cerebellar basket cells that wrap around the Purkinje cell initial segment. Although the axons contain many vesicles and form terminal endings, most do not synapse directly on the Purkinje cell initial segment but rather end blindly."^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao732341560"^^xsd:string .
SAO:758620702 a owl:Class ;
rdfs:label "Juxtaparanode"^^xsd:string ;
skos:prefLabel "Juxtaparanode"^^xsd:string ;
skos:definition "Region of nodal complex adjacent to the paranode"^^xsd:string ;
rdfs:subClassOf SAO:596411490 ;
NIFRID:sao_ID "sao758620702"^^xsd:string .
SAO:772007592 a owl:Class ;
rdfs:label "Dense Core Vesicle"^^xsd:string ;
skos:prefLabel "Dense Core Vesicle"^^xsd:string ;
skos:definition "40-60 nm vesicle containing an electron dense granule, 15-20 nm in diameter (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:478230652 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao772007592"^^xsd:string ;
NIFRID:umls_ID "C0887944"^^xsd:string ;
skos:example .
SAO:787716553 a owl:Class ;
rdfs:label "Cilium"^^xsd:string ;
skos:prefLabel "Cilium"^^xsd:string ;
skos:definition "Cilia arising from neurons have been described in many different regions of the nervous system. Neuronal cilia have a \"9+0\" pattern, that is, they are missing the central pair of microtubules that characterizes most cilia (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:830981606 ;
NIFRID:gene_Ontology_ID "0005929"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao787716553"^^xsd:string ;
NIFRID:umls_ID "C0008778"^^xsd:string ;
skos:example .
SAO:792027222 a owl:Class ;
rdfs:label "Pre-synaptic Active Zone"^^xsd:string ;
skos:prefLabel "Pre-synaptic Active Zone"^^xsd:string ;
skos:definition "A specialized presynaptic plasma membrane region where synaptic vesicles dock and fuse (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:2108323256 ;
NIFRID:gene_Ontology_ID "0048786"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao792027222"^^xsd:string ;
skos:example .
SAO:793088923 a owl:Class ;
rdfs:label "Nissl Body"^^xsd:string ;
skos:prefLabel "Nissl Body"^^xsd:string ;
skos:definition "Stacks of rough endoplasmic reticulum that stain intensely with basophilic dyes."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao793088923"^^xsd:string .
SAO:797538226 a owl:Class ;
rdfs:label "Vesicle Lumen"^^xsd:string ;
skos:prefLabel "Vesicle Lumen"^^xsd:string ;
skos:definition "The volume enclosed by the membrane or protein that forms a vesicle (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:927884761 ;
NIFRID:gene_Ontology_ID "0031983"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao797538226"^^xsd:string .
SAO:819927218 a owl:Class ;
rdfs:label "Golgi-associated Vesicle"^^xsd:string ;
skos:prefLabel "Golgi-associated Vesicle"^^xsd:string ;
skos:definition "Any vesicles associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:624292949 ;
NIFRID:gene_Ontology_ID "0005798"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao819927218"^^xsd:string ;
NIFRID:umls_ID "C0230767"^^xsd:string .
SAO:820130069 a owl:Class ;
rdfs:label "Pyramidal Neuronal Cell Body"^^xsd:string ;
skos:prefLabel "Pyramidal Neuronal Cell Body"^^xsd:string ;
rdfs:subClassOf SAO:1044911821 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-820130069"^^xsd:string .
SAO:830092290 a owl:Class ;
rdfs:label "Internode Axon"^^xsd:string ;
skos:prefLabel "Internode Axon"^^xsd:string ;
rdfs:subClassOf SAO:340271629,
[ a owl:Restriction ;
owl:onProperty NIFRID:proper_part_of ;
owl:someValuesFrom SAO:1770195789 ] ;
owl:disjointWith SAO:936144858 ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:1791490892 ;
NIFRID:sao_ID "sao830092290"^^xsd:string .
SAO:830981606 a owl:Class ;
rdfs:label "Intracellular Membrane"^^xsd:string ;
skos:prefLabel "Intracellular Membrane"^^xsd:string ;
rdfs:subClassOf SAO:6433132645 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao830981606"^^xsd:string .
SAO:831502550 a owl:Class ;
rdfs:label "Regional Part Of Oligodendrocyte"^^xsd:string ;
skos:prefLabel "Regional Part Of Oligodendrocyte"^^xsd:string ;
rdfs:subClassOf SAO:895885284 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao831502550"^^xsd:string .
SAO:864921383 a owl:Class ;
rdfs:label "Regional Part Of Neuron"^^xsd:string ;
skos:prefLabel "Regional Part Of Neuron"^^xsd:string ;
NIFRID:synonym "neuron compartment"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:895885284 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao864921383"^^xsd:string .
SAO:866168499 a owl:Class ;
rdfs:label "Regional Part Of Spine"^^xsd:string ;
skos:prefLabel "Regional Part Of Spine"^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
owl:disjointWith SAO:867568886 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao866168499"^^xsd:string .
SAO:867568886 a owl:Class ;
rdfs:label "Neuron Process"^^xsd:string ;
skos:prefLabel "Neuron Process"^^xsd:string ;
NIFRID:synonym "Neurite"^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
NIFRID:sao_ID "sao-867568886"^^xsd:string .
SAO:873654461 a owl:Class ;
rdfs:label "Nodal Complex"^^xsd:string ;
skos:prefLabel "Nodal Complex"^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
NIFRID:sao_ID "sao873654461"^^xsd:string ;
skos:example .
SAO:876577163 a owl:Class ;
rdfs:label "Mushroom Dendritic Spine"^^xsd:string ;
skos:prefLabel "Mushroom Dendritic Spine"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
owl:disjointWith SAO:965204139 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-876577163"^^xsd:string ;
skos:example .
SAO:877341397 a owl:Class ;
rdfs:label "Regional Part Of Tanycyte"^^xsd:string ;
skos:prefLabel "Regional Part Of Tanycyte"^^xsd:string ;
rdfs:subClassOf SAO:895885284 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao877341397"^^xsd:string .
SAO:879919129 a owl:Class ;
rdfs:label "Clathrin Coat"^^xsd:string ;
skos:prefLabel "Clathrin Coat"^^xsd:string ;
skos:definition "A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1177708494 ;
NIFRID:gene_Ontology_ID "0030118"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao879919129"^^xsd:string ;
NIFRID:umls_ID "C1166728"^^xsd:string .
SAO:884265541 a owl:Class ;
rdfs:label "Dendritic Branch"^^xsd:string ;
skos:prefLabel "Dendritic Branch"^^xsd:string ;
skos:definition "Refers to dendrites arising from another dendrite."^^xsd:string ;
rdfs:subClassOf SAO:420754792 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao884265541"^^xsd:string .
SAO:885490876 a owl:Class ;
rdfs:label "Transport Vesicle"^^xsd:string ;
skos:prefLabel "Transport Vesicle"^^xsd:string ;
NIFRID:synonym "secretory vesicle"^^xsd:string ;
skos:definition "Any of the vesicles of the constitutive secretory pathway, which carry cargo from the ER to the Golgi, between Golgi cisternae, and to destinations within or outside the cell (Gene Ontolgoy)."^^xsd:string ;
rdfs:subClassOf SAO:180601769 ;
NIFRID:gene_Ontology_ID "0030133"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao885490876"^^xsd:string ;
NIFRID:umls_ID "C0887882"^^xsd:string .
SAO:895885284 a owl:Class ;
rdfs:label "Regional Part Of Glial Cell"^^xsd:string ;
skos:prefLabel "Regional Part Of Glial Cell"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao895885284"^^xsd:string .
SAO:901230115 a owl:Class ;
rdfs:label "Neck Portion"^^xsd:string ;
skos:prefLabel "Neck Portion"^^xsd:string ;
skos:definition "Elongated portion of the tanycyte that sticks into the periventricular layer of neuropil where it appears to contact a blood vessel; characterized by numerous cytoplasmic extensions (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:877341397 ;
NIFRID:sao_ID "sao901230115"^^xsd:string .
SAO:914572699 a owl:Class ;
rdfs:label "Synapse"^^xsd:string ;
skos:prefLabel "Synapse"^^xsd:string ;
skos:definition "The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1395777368 ;
NIFRID:gene_Ontology_ID "0045202"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao914572699"^^xsd:string .
SAO:924713546 a owl:Class ;
rdfs:label "Terminal Loop"^^xsd:string ;
skos:prefLabel "Terminal Loop"^^xsd:string ;
skos:definition "Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath."^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao924713546"^^xsd:string .
SAO:927884761 a owl:Class ;
rdfs:label "SER Lumen"^^xsd:string ;
skos:prefLabel "SER Lumen"^^xsd:string ;
NIFRID:synonym "smooth endoplasmic reticulum lumen"^^xsd:string ;
skos:definition "The volume enclosed by the membranes of the smooth endoplasmic reticulum (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
NIFRID:gene_Ontology_ID "0048238"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao927884761"^^xsd:string .
SAO:936144858 a owl:Class ;
rdfs:label "Paranode Axon"^^xsd:string ;
skos:prefLabel "Paranode Axon"^^xsd:string ;
rdfs:subClassOf SAO:340271629,
[ a owl:Restriction ;
owl:onProperty NIFRID:proper_part_of ;
owl:someValuesFrom SAO:1770195789 ] ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:1791490892 ;
NIFRID:sao_ID "sao936144858"^^xsd:string .
SAO:937871668 a owl:Class ;
rdfs:label "Spiny Bracelet Of Nageotte"^^xsd:string ;
skos:prefLabel "Spiny Bracelet Of Nageotte"^^xsd:string ;
skos:definition "Paranodal terminations of Schwann cells that do not directly contact the paranodal axon membane. Usually found in thicker myelin. (Sosinsky et al., 2005)"^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao937871668"^^xsd:string .
SAO:946766835 a owl:Class ;
rdfs:label "Synaptic Site"^^xsd:string ;
skos:prefLabel "Synaptic Site"^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
NIFRID:sao_ID "sao-946766835"^^xsd:string .
SAO:952483289 a owl:Class ;
rdfs:label "Intermediate Filament"^^xsd:string ;
skos:prefLabel "Intermediate Filament"^^xsd:string ;
skos:definition "A distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: keratin filaments of mammalian epithelial cells; desmin filaments found in cells of muscles of all types; vimentin filaments found in mesenchymal cells; neurofilaments of neurons; and glial filaments found in all types of glial cells (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1635329413 ;
NIFRID:gene_Ontology_ID "0005882"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao952483289"^^xsd:string ;
NIFRID:umls_ID "C0021770"^^xsd:string .
SAO:952643730 a owl:Class ;
rdfs:label "Spine Head"^^xsd:string ;
skos:prefLabel "Spine Head"^^xsd:string ;
rdfs:subClassOf SAO:866168499 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao952643730"^^xsd:string .
SAO:961694769 a owl:Class ;
rdfs:label "Excrescence"^^xsd:string ;
skos:prefLabel "Excrescence"^^xsd:string ;
rdfs:subClassOf SAO:250931889 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-961694769"^^xsd:string .
SAO:965204139 a owl:Class ;
rdfs:label "Branched Dendritic Spine"^^xsd:string ;
skos:prefLabel "Branched Dendritic Spine"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-965204139"^^xsd:string ;
skos:example .
SAO:967812059 a owl:Class ;
rdfs:label "Fibrillary Inclusion"^^xsd:string ;
skos:prefLabel "Fibrillary Inclusion"^^xsd:string ;
skos:definition "Cellular inclusion found in cytoplasm of giant cells of Dieters in lateral vestibular nucleus of the rat consisting of circular areas filled with fine slender filaments about 10 nanometers in diameter, delimited by a wall of varying complexity either a single continuous membrane or a tubular network consisting of a fine filamentous material giving the wall a honeycomb appearance. Similar structures have been discribed in the ventral cochlear nucleus, spinal cord, substantia nigra. First described by Sitelo and Palay, 1968. (from Peters, Palay, and Webster)"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao967812059"^^xsd:string .
SAO:976831666 a owl:Class ;
rdfs:label "Lumen Cargo"^^xsd:string ;
skos:prefLabel "Lumen Cargo"^^xsd:string ;
skos:definition "Refers to cargo carried in the lumen of the vesicle; may be crystalized or otherwise bound, e.g., insulin."^^xsd:string ;
rdfs:subClassOf SAO:1490223249 ;
NIFRID:sao_ID "sao976831666"^^xsd:string .
SAO:978443756 a owl:Class ;
rdfs:label "Endosomal Membrane"^^xsd:string ;
skos:prefLabel "Endosomal Membrane"^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao978443756"^^xsd:string .
SAO:991156472 a owl:Class ;
owl:deprecated true ;
rdfs:label "Cell Component Aggregate Object"^^xsd:string ;
skos:prefLabel "Cell Component Aggregate Object"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
NIFRID:sao_ID "sao991156472"^^xsd:string .
SAO:1004601938 a owl:Class ;
rdfs:label "Dense Material"^^xsd:string ;
skos:prefLabel "Dense Material"^^xsd:string ;
rdfs:subClassOf SAO:1682692988 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1004601938"^^xsd:string .
SAO:1028571114 a owl:Class ;
rdfs:label "Sorting Endosome"^^xsd:string ;
skos:prefLabel "Sorting Endosome"^^xsd:string ;
skos:definition "Multivesicular bodies surrounded by and connected with multiple tubular compartments with associated vesicles. MVB-tubule complexes are posited by Clooney et al. (2002) to correspond to sorting endosomes."^^xsd:string ;
rdfs:subClassOf SAO:1720343330 ;
owl:disjointWith SAO:1570660411 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1028571114"^^xsd:string .
SAO:1036339110 a owl:Class ;
rdfs:label "Endoplasmic Reticulum"^^xsd:string ;
skos:prefLabel "Endoplasmic Reticulum"^^xsd:string ;
skos:definition "The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:451912436,
SAO:499555322,
SAO:585356902,
SAO:725931194,
SAO:1702920020,
SAO:1720343330,
SAO:1860313010,
SAO:2045955158 ;
NIFRID:gene_Ontology_ID "0005783"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1036339110"^^xsd:string ;
NIFRID:umls_ID "C0014239"^^xsd:string ;
skos:example ,
.
SAO:1037637579 a owl:Class ;
rdfs:label "Membrane Cargo"^^xsd:string ;
skos:prefLabel "Membrane Cargo"^^xsd:string ;
skos:definition "Refers to integral membrane proteins carried via the vesicle membrane."^^xsd:string ;
rdfs:subClassOf SAO:1490223249 ;
owl:disjointWith SAO:976831666 ;
NIFRID:sao_ID "sao1037637579"^^xsd:string .
SAO:1038025871 a owl:Class ;
rdfs:label "Polyribosome"^^xsd:string ;
skos:prefLabel "Polyribosome"^^xsd:string ;
skos:definition "A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro. (From Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed) (MSH)."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
owl:disjointWith SAO:445019788,
SAO:1747012216 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1038025871"^^xsd:string ;
NIFRID:umls_ID "C0032592"^^xsd:string ;
skos:example ,
.
SAO:1039242387 a owl:Class ;
rdfs:label "Trans Face"^^xsd:string ;
skos:prefLabel "Trans Face"^^xsd:string ;
skos:definition "The concave side of the Golgi apparatus, from which secretory vesicles emerge (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1546288504 ;
owl:disjointWith SAO:9456487,
SAO:138219748,
SAO:632188024 ;
NIFRID:gene_Ontology_ID "0005802"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1039242387"^^xsd:string .
SAO:1044911821 a owl:Class ;
rdfs:label "Neuronal Cell Body"^^xsd:string ;
skos:prefLabel "Neuronal Cell Body"^^xsd:string ;
NIFRID:synonym "soma"^^xsd:string ;
skos:definition "Cell body which consists of the plasma membrane and the cytoplasm surrounding the nucleus of the neuron (FMA)."^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
owl:disjointWith SAO:250931889,
SAO:420949334,
SAO:866168499,
SAO:867568886,
SAO:1049717962 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1044911821"^^xsd:string ;
NIFRID:umls_ID "C0599444"^^xsd:string .
SAO:1045389829 a owl:Class ;
rdfs:label "Mitochondrial Membrane"^^xsd:string ;
skos:prefLabel "Mitochondrial Membrane"^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
owl:disjointWith SAO:978443756,
SAO:1153182838 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1045389829"^^xsd:string .
SAO:1046371754 a owl:Class ;
rdfs:label "Filopodium"^^xsd:string ;
skos:prefLabel "Filopodium"^^xsd:string ;
skos:definition "Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward (Gene Ontology)"^^xsd:string ;
rdfs:subClassOf SAO:250931889 ;
owl:disjointWith SAO:961694769,
SAO:1145756102 ;
NIFRID:gene_Ontology_ID "0030175"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1046371754"^^xsd:string ;
skos:example .
SAO:1048004962 a owl:Class ;
rdfs:label "Tyrosine Kinase Receptor"^^xsd:string ;
skos:prefLabel "Tyrosine Kinase Receptor"^^xsd:string ;
skos:definition "A class of cellular receptors that have an intrinsic protein-tyrosine kinase activity (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:452970150 ;
owl:disjointWith SAO:587592318 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1048004962"^^xsd:string ;
NIFRID:umls_ID "C0206364"^^xsd:string .
SAO:1049471211 a owl:Class ;
rdfs:label "Interchromatin Granule"^^xsd:string ;
skos:prefLabel "Interchromatin Granule"^^xsd:string ;
skos:definition "A class of nuclear body measuring 20-25 nm in diameter and distributed throughout the interchromatin space, linked together by thin fibrils. They are believed to be storage centers for various snRNAs, snRNPs, serine/arginine-rich proteins and RNA polymerase II. A typical mammalian cell contains 25-50 clusters of interchromatin granules. Interchromatin granule clusters do not contain the heterogeneous nuclear RNA-binding proteins (hnRNPs) (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:220861693,
SAO:505137457,
SAO:661522542,
SAO:1455996588,
SAO:1571698684,
SAO:1615953555,
SAO:1687101204,
SAO:1820400233 ;
NIFRID:gene_Ontology_ID "0035061"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1049471211"^^xsd:string ;
NIFRID:umls_ID "C0230547"^^xsd:string .
SAO:1049717962 a owl:Class ;
rdfs:label "Regional Part Of Neuronal Cell Body"^^xsd:string ;
skos:prefLabel "Regional Part Of Neuronal Cell Body"^^xsd:string ;
rdfs:subClassOf SAO:864921383 ;
owl:disjointWith SAO:250931889,
SAO:420949334,
SAO:553711217,
SAO:596411490,
SAO:866168499,
SAO:867568886,
SAO:1186862860,
SAO:1289190043,
SAO:1299635018,
SAO:1367457321,
SAO:1425028079,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1049717962"^^xsd:string .
SAO:1067215520 a owl:Class ;
rdfs:label "Schwann Cell Paranodal Termination"^^xsd:string ;
skos:prefLabel "Schwann Cell Paranodal Termination"^^xsd:string ;
skos:definition "Cytoplasmic pockets, or as they appear in thin sections \"loops\" formed by the Schwann cell in the paranodal region. These pockets are actually part of a continuous helical structure providing cytoplasmic continuity from the inntermost to the outermost layers of the myelin sheath through the cytoplasmic channel formed by the loop. Most are directly apposed to the paranodal axonal membrane"^^xsd:string ;
rdfs:subClassOf SAO:593830697 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1067215520"^^xsd:string .
SAO:1071221672 a owl:Class ;
rdfs:label "Synaptic Vesicle"^^xsd:string ;
skos:prefLabel "Synaptic Vesicle"^^xsd:string ;
skos:definition "Secretory organelles, some 50 nm in diameter, of pre-synaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the pre-synaptic plasma membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:180601769 ;
owl:disjointWith SAO:478230652,
SAO:577473346,
SAO:885490876,
SAO:1362520468 ;
NIFRID:gene_Ontology_ID "0008021"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1071221672"^^xsd:string ;
NIFRID:umls_ID "C0039065"^^xsd:string ;
skos:example ,
,
.
SAO:1074198261 a owl:Class ;
rdfs:label "Post-synaptic Site"^^xsd:string ;
skos:prefLabel "Post-synaptic Site"^^xsd:string ;
rdfs:subClassOf SAO:946766835 ;
rdfs:comment "Before replacing the is_Location_Of property with RO's contained_in and the site_Contained_In property with RO's contained_in, we had the two restrictions: 1) is_Location_Of some Post-synaptic Density and 2) site_Contained_In some Post-synatpic Density. Thus, now we just have one restriction: contained_in some Post-synaptic Density."^^xsd:string ;
NIFRID:sao_ID "sao1074198261"^^xsd:string .
SAO:1078172392 a owl:Class ;
rdfs:label "Trunk"^^xsd:string ;
skos:prefLabel "Trunk"^^xsd:string ;
rdfs:subClassOf SAO:420754792 ;
owl:disjointWith SAO:28175134,
SAO:884265541,
SAO:1348591767 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1078172392"^^xsd:string .
SAO:1079900774 a owl:Class ;
rdfs:label "Basilar Dendrite"^^xsd:string ;
skos:prefLabel "Basilar Dendrite"^^xsd:string ;
NIFRID:synonym "Basal Dendrite"^^xsd:string ;
rdfs:subClassOf SAO:1211023249 ;
owl:disjointWith SAO:273773228 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1079900774"^^xsd:string .
SAO:1081228141 a owl:Class ;
rdfs:label "Glycogen Granule"^^xsd:string ;
skos:prefLabel "Glycogen Granule"^^xsd:string ;
skos:definition "Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface (Gene Ontology). Appears as small, electron dense particles 20-40 nm in diameter. Glycogen is difficult to fix in vivo so amounts may be underestimated (Peters, Palay and Webster)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:11978067,
SAO:120573470,
SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1231384859,
SAO:1397492660,
SAO:1539965131,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:gene_Ontology_ID "0042587"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1081228141"^^xsd:string ;
NIFRID:umls_ID "C0017911"^^xsd:string ;
skos:example .
SAO:1111202255 a owl:Class ;
rdfs:label "Pre-synaptic Dense Body"^^xsd:string ;
skos:prefLabel "Pre-synaptic Dense Body"^^xsd:string ;
NIFRID:synonym "ribbon"^^xsd:string ;
skos:definition "Electron dense structure anchored to the presynaptic membrane closely associated with large numbers of synaptic vesicles, which appear to be tethered to the dense body by several short filaments (from Parsons and Sterling, 2003)."^^xsd:string ;
rdfs:subClassOf SAO:386529203 ;
owl:disjointWith SAO:1730664005 ;
NIFRID:sao_ID "sao1111202255"^^xsd:string .
SAO:1122901839 a owl:Class ;
rdfs:label "Dark Material"^^xsd:string ;
skos:prefLabel "Dark Material"^^xsd:string ;
skos:definition "Irregularly shaped clumps of denatured or misfolded proteins observed in some neurons after a period of ischemia that stain heavily with osmium in electon microscopic preparations."^^xsd:string ;
rdfs:subClassOf SAO:7016027781 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1122901839"^^xsd:string .
SAO:1123256993 a owl:Class ;
rdfs:label "Schwann Cell Compact Myelin"^^xsd:string ;
skos:prefLabel "Schwann Cell Compact Myelin"^^xsd:string ;
skos:definition "The portion of the myelin sheath in which layers of cell membrane are tightly juxtaposed, completely excluding cytoplasm. The juxtaposed cytoplasmic surfaces form the major dense line, while the juxtaposed extracellular surfaces form the interperiod line visible in electron micrographs (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:593830697 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1123256993"^^xsd:string .
SAO:1124888485 a owl:Class ;
rdfs:label "Neuromuscular Junction"^^xsd:string ;
skos:prefLabel "Neuromuscular Junction"^^xsd:string ;
NIFRID:abbrev "NMJ"^^xsd:string ;
skos:definition "The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:289211478 ;
NIFRID:gene_Ontology_ID "0031594"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1124888485"^^xsd:string .
SAO:1139385046 a owl:Class ;
rdfs:label "Free Ribosome"^^xsd:string ;
skos:prefLabel "Free Ribosome"^^xsd:string ;
rdfs:subClassOf SAO:1429207766 ;
owl:disjointWith SAO:1291545653 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1139385046"^^xsd:string .
SAO:1140587416 a owl:Class ;
rdfs:label "Primary Lysosome"^^xsd:string ;
skos:prefLabel "Primary Lysosome"^^xsd:string ;
skos:definition "A lysosome before it has fused with a vesicle or vacuole (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:585356902 ;
owl:disjointWith SAO:1549842807 ;
NIFRID:gene_Ontology_ID "0005766"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1140587416"^^xsd:string ;
NIFRID:umls_ID "C0230814"^^xsd:string .
SAO:1145756102 a owl:Class ;
rdfs:label "Spine"^^xsd:string ;
skos:prefLabel "Spine"^^xsd:string ;
rdfs:subClassOf SAO:250931889,
[ a owl:Restriction ;
owl:onProperty NIFRID:has_proper_part ;
owl:someValuesFrom SAO:553737851 ] ;
owl:disjointWith SAO:961694769 ;
rdfs:comment "Do spines only have a post synaptic density? (Maryann Martone)"^^xsd:string,
"With the restrictions we are trying to say that if you are a spine, you may have one or more of the following parts, a head, a neck or a spinule. If you have one of these parts then you are likely a spine."^^xsd:string ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1145756102"^^xsd:string .
SAO:1152983960 a owl:Class ;
rdfs:label "Intercalated Disk"^^xsd:string ;
skos:prefLabel "Intercalated Disk"^^xsd:string ;
skos:definition "Contact site between adjacent cells in cardiac muscle fibers. When observing tissue through a microscope, this is an identifying feature of cardiac muscle.It holds the myofibrils together and permits easy transfer of excitation (depolarization)."^^xsd:string ;
rdfs:subClassOf SAO:1299635018 ;
owl:disjointWith SAO:1943947957 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1152983960"^^xsd:string .
SAO:1153182838 a owl:Class ;
rdfs:label "Vesicle Membrane"^^xsd:string ;
skos:prefLabel "Vesicle Membrane"^^xsd:string ;
skos:definition "The lipid bilayer surrounding any membrane-bounded vesicle in the cell (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
owl:disjointWith SAO:978443756 ;
NIFRID:gene_Ontology_ID "0012506"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1153182838"^^xsd:string ;
NIFRID:umls_ID "C1167317"^^xsd:string .
SAO:1164727693 a owl:Class ;
rdfs:label "Glutamate Receptor"^^xsd:string ;
skos:prefLabel "Glutamate Receptor"^^xsd:string ;
skos:definition "Cell-surface proteins that bind glutamate and trigger changes which influence the behavior of cells. Glutamate receptors include ionotropic receptors (AMPA, kainate, and N-methyl-D-aspartate receptors), which directly control ion channels, and metabotropic receptors which act through second messenger systems. Glutamate receptors are the most common mediators of fast excitatory synaptic transmission in the central nervous system. They have also been implicated in the mechanisms of memory and of many diseases (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:26622963 ;
NIFRID:modifiedDate "May 1, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:587592318 ;
NIFRID:sao_ID "sao1164727693"^^xsd:string ;
NIFRID:umls_ID "C0061465"^^xsd:string .
SAO:1177708494 a owl:Class ;
rdfs:label "Vesicle Coat"^^xsd:string ;
skos:prefLabel "Vesicle Coat"^^xsd:string ;
skos:definition "Refers to any specialized coating present on a vesicle membrane, e.g., clathrin."^^xsd:string ;
rdfs:subClassOf SAO:1455064842 ;
owl:disjointWith SAO:1490223249 ;
NIFRID:gene_Ontology_ID "0030120"^^xsd:string ;
NIFRID:sao_ID "sao1177708494"^^xsd:string ;
NIFRID:umls_ID "C1166749"^^xsd:string .
SAO:1186327184 a owl:Class ;
rdfs:label "Mitochondrial Chromosome"^^xsd:string ;
skos:prefLabel "Mitochondrial Chromosome"^^xsd:string ;
skos:definition "A chromosome found in the mitochondrion of a eukaryotic cell (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:666410040 ;
owl:disjointWith SAO:1933817066 ;
NIFRID:gene_Ontology_ID "0000262"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1186327184"^^xsd:string ;
NIFRID:umls_ID "C1166687"^^xsd:string .
SAO:1186642361 a owl:Class ;
rdfs:label "Oligodendrocyte Compact Myelin"^^xsd:string ;
skos:prefLabel "Oligodendrocyte Compact Myelin"^^xsd:string ;
skos:definition "The portion of the myelin sheath in which layers of cell membrane are tightly juxtaposed, completely excluding cytoplasm. The juxtaposed cytoplasmic surfaces form the major dense line, while the juxtaposed extracellular surfaces form the interperiod line visible in electron micrographs (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1279474730 ;
NIFRID:gene_Ontology_ID "0043218"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1186642361"^^xsd:string .
SAO:1186862860 a owl:Class ;
rdfs:label "Basal Pole Of Neuron"^^xsd:string ;
skos:prefLabel "Basal Pole Of Neuron"^^xsd:string ;
skos:definition "Portion of a cell soma closest to the point where the basilar dendrite emerges."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1289190043,
SAO:1299635018,
SAO:1367457321,
SAO:1425028079,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1186862860"^^xsd:string .
SAO:1189060993 a owl:Class ;
rdfs:label "Vellous Process"^^xsd:string ;
skos:prefLabel "Vellous Process"^^xsd:string ;
skos:definition "Refers to the fine, veil-like terminal processes of protoplasmic astrocytes."^^xsd:string ;
rdfs:subClassOf SAO:1630537580 ;
owl:disjointWith SAO:1573004591 ;
rdfs:comment "is this the same as what is now termed the peripheral astrocyte process?"^^xsd:string ;
NIFRID:hasCurationStatus "uncurated"^^xsd:string,
NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao1189060993"^^xsd:string .
SAO:1191319089 a owl:Class ;
rdfs:label "Juxta Paranode Axon"^^xsd:string ;
skos:prefLabel "Juxta Paranode Axon"^^xsd:string ;
skos:definition "Region of axon immediately adjacent to the paranode."^^xsd:string ;
rdfs:subClassOf SAO:340271629,
[ a owl:Restriction ;
owl:onProperty NIFRID:proper_part_of ;
owl:someValuesFrom SAO:1770195789 ] ;
owl:disjointWith SAO:188049490,
SAO:830092290,
SAO:936144858 ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:1791490892 ;
NIFRID:sao_ID "sao1191319089"^^xsd:string .
SAO:1196688972 a owl:Class ;
rdfs:label "Post-synaptic Density"^^xsd:string ;
skos:prefLabel "Post-synaptic Density"^^xsd:string ;
skos:definition "Synaptic component; electron dense cytoskeletal specialization located on the post synaptic membrane at the site of synaptic contact. The PSD is particularly prominent in glutamatergic synapses, giving the synapse an asymmetrical appearance. This type of PSD is often referred to as \"asymmetrical\" or Gray's Type 1 (Maryann Martone, from the CCDB Dictionary)."^^xsd:string ;
rdfs:subClassOf SAO:1507566336 ;
NIFRID:bonfireID "BF_C000103"^^xsd:string ;
NIFRID:gene_Ontology_ID "0014069"^^xsd:string ;
NIFRID:sao_ID "sao1196688972"^^xsd:string ;
skos:example .
SAO:1210952635 a owl:Class ;
rdfs:label "Nucleolus-associated Heterochromatin"^^xsd:string ;
skos:prefLabel "Nucleolus-associated Heterochromatin"^^xsd:string ;
skos:definition "Dense particles of heterochromatin, consisting of a loosely twisted strang ~600 A thick, found associated with the nucleolus (Palay and Chan-Palay, 1974)."^^xsd:string ;
rdfs:subClassOf SAO:505137457 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1210952635"^^xsd:string .
SAO:1211023249 a owl:Class ;
rdfs:label "Dendrite"^^xsd:string ;
skos:prefLabel "Dendrite"^^xsd:string ;
skos:definition "A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell (Gene Ontology)."^^xsd:string,
"One of several similar processes that issue from the perikaryon of a neuron, generally specialized for receiving synaptic input from other neurons or transduction of signals from the environment."^^xsd:string ;
rdfs:subClassOf SAO:867568886 ;
owl:disjointWith SAO:1770195789 ;
NIFRID:gene_Ontology_ID "0030425"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1211023249"^^xsd:string ;
NIFRID:umls_ID "C0011305"^^xsd:string ;
skos:example .
SAO:1217793903 a owl:Class ;
rdfs:label "Pars Granulosa"^^xsd:string ;
skos:prefLabel "Pars Granulosa"^^xsd:string ;
skos:definition "Nucleolar compartment consisting of large numbers of small, extremely dense granules 150-300 A in diameter, suspended in a matting of fine filaments (Palay and Chan-Palay, 1974)."^^xsd:string ;
rdfs:subClassOf SAO:113580911 ;
owl:disjointWith SAO:1841764412 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1217793903"^^xsd:string ;
NIFRID:umls_ID "C0230580"^^xsd:string .
SAO:1231384859 a owl:Class ;
rdfs:label "Pigment"^^xsd:string ;
skos:prefLabel "Pigment"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:787716553,
SAO:830981606,
SAO:1397492660,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:hasCurationStatus "uncurated"^^xsd:string ;
NIFRID:sao_ID "sao1231384859"^^xsd:string .
SAO:1232858786 a owl:Class ;
rdfs:label "Thin Dendritic Spine"^^xsd:string ;
skos:prefLabel "Thin Dendritic Spine"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
owl:disjointWith SAO:317384566,
SAO:876577163,
SAO:965204139,
SAO:1536532595 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1232858786"^^xsd:string ;
skos:example .
SAO:1241866791 a owl:Class ;
rdfs:label "Large Vesicle"^^xsd:string ;
skos:prefLabel "Large Vesicle"^^xsd:string ;
skos:definition "Vesicles of same size and content of coated vesicles; posited by Clooney et al. (2002) to represent coated vesicles after uncoating."^^xsd:string ;
rdfs:subClassOf SAO:1362520468 ;
owl:disjointWith SAO:1243595998,
SAO:1925368674 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1241866791"^^xsd:string .
SAO:1243595998 a owl:Class ;
rdfs:label "Clathrin Coated Endocytic Vesicle"^^xsd:string ;
skos:prefLabel "Clathrin Coated Endocytic Vesicle"^^xsd:string ;
skos:definition "A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1362520468 ;
owl:disjointWith SAO:1925368674 ;
NIFRID:gene_Ontology_ID "0045334"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1243595998"^^xsd:string ;
skos:example .
SAO:1246280606 a owl:Class ;
rdfs:label "Synthetic Enzyme"^^xsd:string ;
skos:prefLabel "Synthetic Enzyme"^^xsd:string ;
owl:disjointWith SAO:587592318 ;
rdfs:comment "This class classifies fine under 'Enzyme', while loaded with NIF-Molecule.owl module."^^xsd:string ;
NIFRID:modifiedDate "April 22, 2009"^^xsd:string ;
NIFRID:hasCurationStatus "uncurated"^^xsd:string ;
NIFRID:hasFormerParentClass SAO:1440704204 ;
NIFRID:sao_ID "sao1246280606"^^xsd:string ;
NIFRID:umls_ID "C0597548"^^xsd:string .
SAO:1253297813 a owl:Class ;
rdfs:label "Glial Subcompartment"^^xsd:string ;
skos:prefLabel "Glial Subcompartment"^^xsd:string ;
rdfs:subClassOf SAO:895885284 ;
owl:disjointWith SAO:195217619,
SAO:685712019,
SAO:831502550 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1253297813"^^xsd:string .
SAO:1279474730 a owl:Class ;
rdfs:label "Oligodendrocyte Myelin Sheath"^^xsd:string ;
skos:prefLabel "Oligodendrocyte Myelin Sheath"^^xsd:string ;
skos:definition "An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:831502550 ;
NIFRID:gene_Ontology_ID "0043209"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1279474730"^^xsd:string ;
NIFRID:umls_ID "C0026973"^^xsd:string .
SAO:1289190043 a owl:Class ;
rdfs:label "Cellular Space"^^xsd:string ;
skos:prefLabel "Cellular Space"^^xsd:string ;
skos:definition "Anatomical space occurring within a cell, usually formed by intracellular membranes."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1299635018,
SAO:1367457321,
SAO:1425028079,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1289190043"^^xsd:string .
SAO:1289741256 a owl:Class ;
rdfs:label "Mitochondrial Membrane Outer"^^xsd:string ;
skos:prefLabel "Mitochondrial Membrane Outer"^^xsd:string ;
skos:definition "The membrane on the outer surface of the mitochondrion, interfacing with the cell cytoplasm (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1045389829 ;
owl:disjointWith SAO:1371347282 ;
NIFRID:gene_Ontology_ID "0005741"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1289741256"^^xsd:string ;
NIFRID:umls_ID "C0230839"^^xsd:string ;
skos:example .
SAO:1291545653 a owl:Class ;
rdfs:label "Membrane Bound Ribosome"^^xsd:string ;
skos:prefLabel "Membrane Bound Ribosome"^^xsd:string ;
skos:definition "A ribosome that is attached to a intracellular membrane. Does not itself have a membrane surrounding it."^^xsd:string ;
rdfs:subClassOf SAO:1429207766 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1291545653"^^xsd:string .
SAO:1299635018 a owl:Class ;
rdfs:label "Cell Cell Contact Zone"^^xsd:string ;
skos:prefLabel "Cell Cell Contact Zone"^^xsd:string ;
skos:definition "Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle"^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1367457321,
SAO:1425028079,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
rdfs:comment "We still don't know if the synapse, in the sense that it is typically used, belongs here or whether large, multicontact synapses like the neuromuscular junction and the calycl synapse of Held, belong here and not simple synapses"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1299635018"^^xsd:string .
SAO:1311109124 a owl:Class ;
rdfs:label "Electrotonic Synapse"^^xsd:string ;
skos:prefLabel "Electrotonic Synapse"^^xsd:string ;
NIFRID:synonym "Electrical Synapse"^^xsd:string ;
skos:definition "Electrotonic synapses are gap junctions that allow the passage of ions directly from cell to cell. Ultrastructurally, it can be recognized as a 7 layered structure with 4 dense lines, two from each of the plasma membranes, alternating with 3 lighter lines. Electrotonic synapses are generally symmetric and display little or no dense material associated with the cytoplasmic face of the plasma membrane (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:914572699 ;
owl:disjointWith SAO:289211478,
SAO:1506103497 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1311109124"^^xsd:string ;
skos:example ,
.
SAO:1316272517 a owl:Class ;
rdfs:label "Neurofilament"^^xsd:string ;
skos:prefLabel "Neurofilament"^^xsd:string ;
skos:definition "A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:952483289 ;
owl:disjointWith SAO:1863852493 ;
NIFRID:gene_Ontology_ID "0005883"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1316272517"^^xsd:string ;
NIFRID:umls_ID "C0027834"^^xsd:string ;
skos:example .
SAO:1329750433 a owl:Class ;
rdfs:label "Membrane Surface"^^xsd:string ;
skos:prefLabel "Membrane Surface"^^xsd:string ;
rdfs:subClassOf BFO:0000146 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1329750433"^^xsd:string .
SAO:1337158144 a owl:Class ;
rdfs:label "Cellular Component"^^xsd:string ;
skos:definition "Cell part which has a definable shape, bounded predominantly by bonafide boundaries and is countable (FMA)."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
rdfs:comment "Equivalent to \"constitutional part\" in the FMA--a primary partition of an anatomical structure into its compositionally distinct anatomical elements. In the context of the whole, an element is any relatively simple component of which a larger, more complex anatomical structure is compounded; i.e., teh partition is compositional rather than spatial (Mejino JLV et al., 2003)."^^xsd:string ;
NIFRID:gene_Ontology_ID "0005575"^^xsd:string .
SAO:1340260079 a owl:Class ;
rdfs:label "Tuft"^^xsd:string ;
skos:prefLabel "Tuft"^^xsd:string ;
NIFRID:synonym "dendritic tuft"^^xsd:string ;
skos:definition "The terminal specialization found in some types of dendrites consisting of numerous small terminal branches, giving the dendrite a tufted appearance."^^xsd:string ;
rdfs:subClassOf SAO:28175134 ;
owl:disjointWith SAO:295057932,
SAO:1594955670 ;
NIFRID:modifiedDate "April 28, 2010"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1340260079"^^xsd:string .
SAO:1342297498 a owl:Class ;
rdfs:label "Amyloid Fibril"^^xsd:string ;
skos:prefLabel "Amyloid Fibril"^^xsd:string ;
skos:definition "A fibril composed of amyloid protein."^^xsd:string ;
rdfs:subClassOf SAO:5051906853 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:sao_ID "sao1342297498"^^xsd:string ;
skos:example .
SAO:1348591767 a owl:Class ;
rdfs:label "Branch Point Of Dendrite"^^xsd:string ;
skos:prefLabel "Branch Point Of Dendrite"^^xsd:string ;
rdfs:subClassOf SAO:420754792 ;
owl:disjointWith SAO:28175134,
SAO:884265541 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1348591767"^^xsd:string .
SAO:1354781919 a owl:Class ;
rdfs:label "Oligodendrocyte Paranodal Termination"^^xsd:string ;
skos:prefLabel "Oligodendrocyte Paranodal Termination"^^xsd:string ;
NIFRID:synonym "Paranodal loop"^^xsd:string ;
skos:definition "Cytoplasmic pockets, or as they appear in thin sections \"loops\" formed by the Schwann cell in the paranodal region. These pockets are actually part of a continuous helical structure providing cytoplasmic continuity from the inntermost to the outermost layers of the myelin sheath through the cytoplasmic channel formed by the loop. Most are directly apposed to the paranodal axonal membrane"^^xsd:string ;
rdfs:subClassOf SAO:1279474730 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1354781919"^^xsd:string .
SAO:1362520468 a owl:Class ;
rdfs:label "Endocytic Vesicle"^^xsd:string ;
skos:prefLabel "Endocytic Vesicle"^^xsd:string ;
skos:definition "A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:180601769 ;
owl:disjointWith SAO:478230652,
SAO:577473346,
SAO:885490876 ;
NIFRID:gene_Ontology_ID "0030139"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1362520468"^^xsd:string ;
NIFRID:umls_ID "C0887883"^^xsd:string .
SAO:1367457321 a owl:Class ;
rdfs:label "Mitochondrial Site"^^xsd:string ;
skos:prefLabel "Mitochondrial Site"^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1425028079,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:sao_ID "sao-1367457321"^^xsd:string .
SAO:1371347282 a owl:Class ;
rdfs:label "Mitochondrial Membrane Inner"^^xsd:string ;
skos:prefLabel "Mitochondrial Membrane Inner"^^xsd:string ;
skos:definition "The inner membrane of the mitochondria. It is highly folded to form cristae (Gene Ontology). The inner membrane of the mitochondria. It is highly folded to form cristae (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1045389829 ;
NIFRID:gene_Ontology_ID "0005743"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1371347282"^^xsd:string ;
NIFRID:umls_ID "C0230840"^^xsd:string ;
skos:example .
SAO:1376748732 a owl:Class ;
rdfs:label "Ensheathing Process"^^xsd:string ;
skos:prefLabel "Ensheathing Process"^^xsd:string ;
skos:definition "Refers to the process of the Schwann cell that surrounds an unmyelinated axon or cell soma."^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1376748732"^^xsd:string ;
skos:example .
SAO:1379604862 a owl:Class ;
rdfs:label "Lamellar Body"^^xsd:string ;
skos:prefLabel "Lamellar Body"^^xsd:string ;
skos:definition "Membranous inclusions composed of stacks of unperforated cisternae derived from the granular endoplasmic reticulum. Cisternae are spaced at intervals of about 30-40 nm (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
NIFRID:gene_Ontology_ID "0042599"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1379604862"^^xsd:string .
SAO:1382918459 a owl:Class ;
rdfs:label "Inter-Golgi Transport Vesicle"^^xsd:string ;
skos:prefLabel "Inter-Golgi Transport Vesicle"^^xsd:string ;
skos:definition "A vesicle that mediates transport of cargo within the Golgi complex (for example, between cisternae of the Golgi stack) (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:885490876 ;
NIFRID:gene_Ontology_ID "0030143"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1382918459"^^xsd:string .
SAO:1395777368 a owl:Class ;
rdfs:label "Intercellular Junction"^^xsd:string ;
skos:prefLabel "Intercellular Junction"^^xsd:string ;
rdfs:subClassOf SAO:508165343 ;
owl:disjointWith SAO:205380252,
SAO:732341560 ;
NIFRID:sao_ID "sao1395777368"^^xsd:string .
SAO:1397492660 a owl:Class ;
rdfs:label "Basal Lamina"^^xsd:string ;
skos:prefLabel "Basal Lamina"^^xsd:string ;
skos:definition "A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:9117790637 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1539965131,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:gene_Ontology_ID "0005605"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1397492660"^^xsd:string ;
NIFRID:umls_ID "C0242195"^^xsd:string .
SAO:1400623473 a owl:Class ;
rdfs:label "Zonula Adhaerens"^^xsd:string ;
skos:prefLabel "Zonula Adhaerens"^^xsd:string ;
NIFRID:synonym "fascia adhaerens"^^xsd:string ;
skos:definition "Adherent, symmetrical junction characterized by widened extracellular space and filamentous material (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
owl:disjointWith SAO:427941916,
SAO:946766835,
SAO:1939999134,
SAO:1956738165 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1400623473"^^xsd:string ;
skos:example .
SAO:1425028079 a owl:Class ;
rdfs:label "Extracellular Space"^^xsd:string ;
skos:prefLabel "Extracellular Space"^^xsd:string ;
skos:definition "That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1579007712,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:gene_Ontology_ID "0005616"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1425028079"^^xsd:string ;
skos:example .
SAO:1429207766 a owl:Class ;
rdfs:label "Ribosome"^^xsd:string ;
skos:prefLabel "Ribosome"^^xsd:string ;
skos:definition "An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1456184038 ;
owl:disjointWith SAO:95019936,
SAO:1820400233 ;
NIFRID:gene_Ontology_ID "0005840"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1429207766"^^xsd:string ;
NIFRID:umls_ID "C0035553"^^xsd:string ;
skos:example .
SAO:1447478620 a owl:Class ;
rdfs:label "Pial Endfoot"^^xsd:string ;
skos:prefLabel "Pial Endfoot"^^xsd:string ;
rdfs:subClassOf SAO:877341397 ;
owl:disjointWith SAO:401910342,
SAO:901230115,
SAO:1749953771,
SAO:2064469343 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1447478620"^^xsd:string .
SAO:1455064842 a owl:Class ;
rdfs:label "Vesicle Subcomponent"^^xsd:string ;
skos:prefLabel "Vesicle Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:sao_ID "sao1455064842"^^xsd:string .
SAO:1455996588 a owl:Class ;
rdfs:label "Nuclear Lamina"^^xsd:string ;
skos:prefLabel "Nuclear Lamina"^^xsd:string ;
skos:definition "Meshwork of extremely fine filaments composed of polypeptides called lamins that run parallel with the inner surface of the nuclear envelope (Peters, Palay and Webster, 1991)."^^xsd:string,
"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:220861693,
SAO:505137457,
SAO:661522542,
SAO:1571698684,
SAO:1615953555,
SAO:1687101204,
SAO:1820400233 ;
NIFRID:gene_Ontology_ID "0005652"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1455996588"^^xsd:string ;
NIFRID:umls_ID "C1136039"^^xsd:string .
SAO:1456184038 a owl:Class ;
rdfs:label "Non Membrane Bound Organelle"^^xsd:string ;
skos:prefLabel "Non Membrane Bound Organelle"^^xsd:string ;
skos:definition "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1539965131 ;
owl:disjointWith SAO:414196390 ;
NIFRID:gene_Ontology_ID "0043228"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1456184038"^^xsd:string .
SAO:1470121605 a owl:Class ;
rdfs:label "Active Zone Cytomatrix"^^xsd:string ;
skos:prefLabel "Active Zone Cytomatrix"^^xsd:string ;
skos:definition "Filamentous matrix immediately internal to the plasma membrane docking zone (Zhai and Bellen, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:1911631652 ;
owl:disjointWith SAO:494258938,
SAO:1730664005,
SAO:2038461087 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1470121605"^^xsd:string .
SAO:1470140754 a owl:Class ;
rdfs:label "Axon Collateral"^^xsd:string ;
skos:prefLabel "Axon Collateral"^^xsd:string ;
skos:definition "Smaller branches of an axon that emanate from the main axon cylinder."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:203987954,
SAO:256000789,
SAO:627227260,
SAO:1586851177,
SAO:1596975044,
SAO:2007137787 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1470140754"^^xsd:string .
SAO:1488888179 a owl:Class ;
rdfs:label "Pre-synaptic Ribbon"^^xsd:string ;
skos:prefLabel "Pre-synaptic Ribbon"^^xsd:string ;
skos:definition "Dense plate-like structure lying near and perpendicular to the pre-synaptic junction. Usually associated with pre-synaptic vesicles (Peters, Palay, and Webster)."^^xsd:string ;
rdfs:subClassOf SAO:386529203 ;
NIFRID:sao_ID "sao-1488888179"^^xsd:string ;
skos:example .
SAO:1490223249 a owl:Class ;
rdfs:label "Vesicle Cargo"^^xsd:string ;
skos:prefLabel "Vesicle Cargo"^^xsd:string ;
skos:definition "Refers to the contents contained in the vesicle."^^xsd:string ;
rdfs:subClassOf SAO:1455064842 ;
rdfs:comment "Need to determine whether this should be a part of a vesicle; I think it shouldn't be"^^xsd:string ;
NIFRID:sao_ID "sao1490223249"^^xsd:string .
SAO:1499850686 a owl:Class ;
rdfs:label "Nuclear Subcomponent"^^xsd:string ;
skos:prefLabel "Nuclear Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1499850686"^^xsd:string .
SAO:1506103497 a owl:Class ;
rdfs:label "Mixed Synapse"^^xsd:string ;
skos:prefLabel "Mixed Synapse"^^xsd:string ;
skos:definition "Existence of both chemical and electrotonic synapses at the same interface (Peters, Palay and Webster, 1991)."^^xsd:string,
"Synaptic contact characterized by both electrical and chemical synaptic junctions."^^xsd:string ;
rdfs:subClassOf SAO:914572699 ;
owl:disjointWith SAO:289211478 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1506103497"^^xsd:string .
SAO:1507566336 a owl:Class ;
rdfs:label "Post-synaptic Component"^^xsd:string ;
skos:prefLabel "Post-synaptic Component"^^xsd:string ;
rdfs:subClassOf SAO:1784069613 ;
owl:disjointWith SAO:386529203 ;
NIFRID:sao_ID "sao1507566336"^^xsd:string .
SAO:1514682949 a owl:Class ;
rdfs:label "Cytoplasmic Surface"^^xsd:string ;
skos:prefLabel "Cytoplasmic Surface"^^xsd:string ;
rdfs:subClassOf SAO:1329750433 ;
owl:disjointWith SAO:2135015805 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1514682949"^^xsd:string .
SAO:1524397168 a owl:Class ;
rdfs:label "Junctional Site"^^xsd:string ;
skos:prefLabel "Junctional Site"^^xsd:string ;
rdfs:subClassOf SAO:946766835 ;
NIFRID:sao_ID "sao1524397168"^^xsd:string .
SAO:1531915298 a owl:Class ;
rdfs:label "Amorphous Vesicle"^^xsd:string ;
skos:prefLabel "Amorphous Vesicle"^^xsd:string ;
skos:definition "Category of non-SER vesicle described by Clooney et al. (2002) in dendrites, categorized by smooth membranes, electron-lucent interiors and irregular shapes. Sometimes occurrs in clumps. These vesicles contained gold taken up from the extracellular space, suggesting that they may be part of the endosomal pathway."^^xsd:string ;
rdfs:subClassOf SAO:577473346 ;
owl:disjointWith SAO:403156667 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1531915298"^^xsd:string .
SAO:1536532595 a owl:Class ;
rdfs:label "Sessile Dendritic Spine"^^xsd:string ;
skos:prefLabel "Sessile Dendritic Spine"^^xsd:string ;
rdfs:subClassOf SAO:1799103720 ;
owl:disjointWith SAO:317384566,
SAO:876577163,
SAO:965204139 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1536532595"^^xsd:string .
SAO:1539965131 a owl:Class ;
rdfs:label "Organelle"^^xsd:string ;
skos:prefLabel "Organelle"^^xsd:string ;
skos:definition "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1635329413,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:gene_Ontology_ID "0043226"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1539965131"^^xsd:string ;
NIFRID:umls_ID "C0029219"^^xsd:string .
SAO:1546288504 a owl:Class ;
rdfs:label "Regional Part Of Golgi"^^xsd:string ;
skos:prefLabel "Regional Part Of Golgi"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
owl:disjointWith SAO:1682692988,
SAO:1686050947,
SAO:2019617624 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1546288504"^^xsd:string .
SAO:1547508851 a owl:Class ;
rdfs:label "Endosomal Lumen"^^xsd:string ;
skos:prefLabel "Endosomal Lumen"^^xsd:string ;
NIFRID:synonym "endosome lumen"^^xsd:string ;
skos:definition "The volume enclosed by the membranes of an endosome (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:254777664,
SAO:343550527,
SAO:797538226,
SAO:927884761,
SAO:1819509473,
SAO:1908934319,
SAO:1956231674 ;
NIFRID:gene_Ontology_ID "0031904"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1547508851"^^xsd:string .
SAO:1549842807 a owl:Class ;
rdfs:label "Secondary Lysosome"^^xsd:string ;
skos:prefLabel "Secondary Lysosome"^^xsd:string ;
skos:definition "Vacuole formed by the fusion of a lysosome with an organelle (autosome) or with a primary phagosome (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:585356902 ;
NIFRID:gene_Ontology_ID "0005767"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1549842807"^^xsd:string ;
NIFRID:umls_ID "C0230815"^^xsd:string .
SAO:1570660411 a owl:Class ;
rdfs:label "Tubular Endosome"^^xsd:string ;
skos:prefLabel "Tubular Endosome"^^xsd:string ;
skos:definition "Endosomal component consisting of cylindrical shaped tubues, ~50 nm in diameter, with smooth outer membranes an dark, grainy interiors (Clooney et al., 2002). Clathrin-like protein coats occur at the ends of some tubular compartments."^^xsd:string ;
rdfs:subClassOf SAO:1720343330 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1570660411"^^xsd:string .
SAO:1571698684 a owl:Class ;
rdfs:label "Barr Body"^^xsd:string ;
skos:prefLabel "Barr Body"^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:220861693,
SAO:505137457,
SAO:661522542,
SAO:1615953555,
SAO:1687101204,
SAO:1820400233 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1571698684"^^xsd:string .
SAO:1573004591 a owl:Class ;
rdfs:label "Peripheral Astrocyte Process"^^xsd:string ;
skos:prefLabel "Peripheral Astrocyte Process"^^xsd:string ;
skos:definition "Thin terminal processes of astrocytes found in sheathing, axon terminals, blood vessels, and pial surface of the brain."^^xsd:string ;
rdfs:subClassOf SAO:1630537580 ;
rdfs:comment "It is not clear whether peripheral astrocyte process only refers to the processes surrounding synapses or also refers to the endfeet"^^xsd:string,
"This comes from derouiche et al. J. Physol. Paris 2002 96:177 PubMedID:12445894"^^xsd:string ;
NIFRID:hasCurationStatus "Thin terminal processes of astrocytes found in sheathing, axon terminals, blood vessels, and pial surface of the brain. These processes are characterized by few glial filiments or organelles and high concentrations of the actin-binding protein ezrin."^^xsd:string,
NIFRID:graph_position_temporary ;
NIFRID:sao_ID "sao1573004591"^^xsd:string .
SAO:1579007712 a owl:Class ;
rdfs:label "Cell Interior"^^xsd:string ;
skos:prefLabel "Cell Interior"^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1877927224,
SAO:1922892319 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1579007712"^^xsd:string .
SAO:1586851177 a owl:Class ;
rdfs:label "Regional Part Of Basket cell axon"^^xsd:string ;
skos:prefLabel "Regional Part Of Basket Cell Axon"^^xsd:string ;
skos:definition "Terminal pre-synaptic ending of an axon or axon collateral."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:203987954,
SAO:256000789,
SAO:627227260,
SAO:1596975044,
SAO:2007137787 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1586851177"^^xsd:string .
SAO:1588493326 a owl:Class ;
rdfs:label "Actin Filament"^^xsd:string ;
skos:prefLabel "Actin Filament"^^xsd:string ;
skos:definition "A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:2006047981 ;
NIFRID:gene_Ontology_ID "0005884"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1588493326"^^xsd:string ;
NIFRID:umls_ID "C0025979"^^xsd:string ;
skos:example .
SAO:1590928667 a owl:Class ;
rdfs:label "Regional Part Of Spiny Dendrite"^^xsd:string ;
skos:prefLabel "Regional Part Of Spiny Dendrite"^^xsd:string ;
rdfs:subClassOf SAO:183270081 ;
owl:disjointWith SAO:1791490892 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1590928667"^^xsd:string .
SAO:1594955670 a owl:Class ;
rdfs:label "Dendritic Growth Cone"^^xsd:string ;
skos:prefLabel "Dendritic Growth Cone"^^xsd:string ;
rdfs:subClassOf SAO:28175134 ;
owl:disjointWith SAO:295057932 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1594955670"^^xsd:string ;
skos:example .
SAO:1596955044 a owl:Class ;
rdfs:label "SER Membrane"^^xsd:string ;
skos:prefLabel "SER Membrane"^^xsd:string ;
skos:definition "The lipid bilayer surrounding the smooth endoplasmic reticulum (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
NIFRID:gene_Ontology_ID "0030868"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1596955044"^^xsd:string .
SAO:1596975044 a owl:Class ;
rdfs:label "Main Axon"^^xsd:string ;
skos:prefLabel "Main Axon"^^xsd:string ;
skos:definition "Used to refer to the main axonal trunk, as opposed to the collaterals."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:203987954,
SAO:256000789,
SAO:627227260,
SAO:2007137787 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1596975044"^^xsd:string .
SAO:1612527463 a owl:Class ;
rdfs:label "Nuclear Inner Membrane"^^xsd:string ;
skos:prefLabel "Nuclear Inner Membrane"^^xsd:string ;
skos:definition "The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1687101204 ;
owl:disjointWith SAO:1617136075 ;
NIFRID:gene_Ontology_ID "0005637"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1612527463"^^xsd:string .
SAO:1615953555 a owl:Class ;
rdfs:label "Chromatin"^^xsd:string ;
skos:prefLabel "Chromatin"^^xsd:string ;
skos:definition "The ordered and organized complex of DNA and protein that forms the chromosome (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:220861693,
SAO:505137457,
SAO:661522542,
SAO:1687101204,
SAO:1820400233 ;
NIFRID:gene_Ontology_ID "0000785"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1615953555"^^xsd:string ;
NIFRID:umls_ID "C0008546"^^xsd:string .
SAO:1617136075 a owl:Class ;
rdfs:label "Nuclear Outer Membrane"^^xsd:string ;
skos:prefLabel "Nuclear Outer Membrane"^^xsd:string ;
skos:definition "The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1687101204 ;
NIFRID:gene_Ontology_ID "0005640"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1617136075"^^xsd:string .
SAO:1630537580 a owl:Class ;
rdfs:label "Astrocyte Process"^^xsd:string ;
skos:prefLabel "Astrocyte Process"^^xsd:string ;
skos:definition "Refers to processes of astrocytes extending from the cell soma that wrap around neurons and conform to cellular components in the neuropil."^^xsd:string ;
rdfs:subClassOf SAO:685712019 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1630537580"^^xsd:string ;
skos:example .
SAO:1634374950 a owl:Class ;
rdfs:label "Hypolemmal Cisternae"^^xsd:string ;
skos:prefLabel "Hypolemmal Cisternae"^^xsd:string ;
skos:definition "Specialized part of the smooth endoplasmic reticulum that closely underlies the plasma membrane, usually within 60 nm or closer (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:699412220 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1634374950"^^xsd:string .
SAO:1635329413 a owl:Class ;
rdfs:label "Cytoskeletal Element"^^xsd:string ;
skos:prefLabel "Cytoskeletal Element"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1663586795,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1635329413"^^xsd:string .
SAO:1642494436 a owl:Class ;
rdfs:label "Recurrent Collateral"^^xsd:string ;
skos:prefLabel "Recurrent Collateral"^^xsd:string ;
skos:definition "Axon collateral that ramifies in the area of the soma of the cell of origin."^^xsd:string ;
rdfs:subClassOf SAO:1470140754 ;
owl:disjointWith SAO:1950673097 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1642494436"^^xsd:string .
SAO:1642908940 a owl:Class ;
rdfs:label "Spine Neck"^^xsd:string ;
skos:prefLabel "Spine Neck"^^xsd:string ;
NIFRID:synonym "neck"^^xsd:string,
"pedicle"^^xsd:string ;
rdfs:subClassOf SAO:866168499 ;
owl:disjointWith SAO:553737851,
SAO:952643730 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1642908940"^^xsd:string .
SAO:1663586795 a owl:Class ;
rdfs:label "Plasma Membrane"^^xsd:string ;
skos:prefLabel "Plasma Membrane"^^xsd:string ;
NIFRID:synonym "cell membrane"^^xsd:string ;
skos:definition "The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:6433132645 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1784069613,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:gene_Ontology_ID "0005886"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1663586795"^^xsd:string ;
NIFRID:UmlsCui "C0007603"^^xsd:string ;
skos:example ,
,
.
SAO:1682692988 a owl:Class ;
rdfs:label "Regional Part Of Spine Apparatus"^^xsd:string ;
skos:prefLabel "Regional Part Of Spine Apparatus"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
owl:disjointWith SAO:1686050947,
SAO:2019617624 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1682692988"^^xsd:string .
SAO:1683772610 a owl:Class ;
rdfs:label "Endosomal Subcomponent"^^xsd:string ;
skos:prefLabel "Endosomal Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1683772610"^^xsd:string .
SAO:1684283879 a owl:Class ;
rdfs:label "Calyx Of Held"^^xsd:string ;
skos:prefLabel "Calyx Of Held"^^xsd:string ;
rdfs:subClassOf SAO:488120195 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1684283879"^^xsd:string .
SAO:1686050947 a owl:Class ;
rdfs:label "Regional Part Of Mitochondrial Membrane"^^xsd:string ;
skos:prefLabel "Regional Part Of Mitochondrial Membrane"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
owl:disjointWith SAO:2019617624 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1686050947"^^xsd:string .
SAO:1687101204 a owl:Class ;
rdfs:label "Nuclear Membrane"^^xsd:string ;
skos:prefLabel "Nuclear Membrane"^^xsd:string ;
skos:definition "Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
owl:disjointWith SAO:220861693,
SAO:505137457,
SAO:661522542,
SAO:1820400233 ;
NIFRID:gene_Ontology_ID "0031965"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1687101204"^^xsd:string ;
NIFRID:umls_ID "C0028584"^^xsd:string .
SAO:1702920020 a owl:Class ;
rdfs:label "Nucleus"^^xsd:string ;
skos:prefLabel "Nucleus"^^xsd:string ;
skos:definition "A membrane-bounded organelle of eukaryotic cells that contains the chromosomes. It is the primary site of DNA replication and RNA synthesis in the cell (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:451912436,
SAO:499555322,
SAO:585356902,
SAO:725931194,
SAO:1720343330,
SAO:1860313010,
SAO:2045955158 ;
NIFRID:gene_Ontology_ID "0005634"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1702920020"^^xsd:string ;
NIFRID:umls_ID "C0007610"^^xsd:string ;
skos:example .
SAO:1720343330 a owl:Class ;
rdfs:label "Endosome"^^xsd:string ;
skos:prefLabel "Endosome"^^xsd:string ;
skos:definition "A membrane-bound organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation (GO)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:451912436,
SAO:499555322,
SAO:585356902,
SAO:725931194,
SAO:1860313010,
SAO:2045955158 ;
NIFRID:gene_Ontology_ID "0005768"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1720343330"^^xsd:string ;
NIFRID:umls_ID "C0034850"^^xsd:string .
SAO:1730664005 a owl:Class ;
rdfs:label "Pre-synaptic Grid"^^xsd:string ;
skos:prefLabel "Pre-synaptic Grid"^^xsd:string ;
skos:definition "A hexagonal array of electron dense particles attched to the cyotplasmic face of the presynaptic membrane, revealed by staining with ethanolic phosphotungstic acid (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:1911631652 ;
owl:disjointWith SAO:494258938,
SAO:2038461087 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1730664005"^^xsd:string .
SAO:1747012216 a owl:Class ;
rdfs:label "Orthogonal Array"^^xsd:string ;
skos:prefLabel "Orthogonal Array"^^xsd:string ;
NIFRID:synonym "square array"^^xsd:string ;
skos:definition "Square arrays of closely spaced intramembrane particles, 4-6 nm in size seen in astrocyte processes, now known to contain aquaporins."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
owl:disjointWith SAO:445019788 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1747012216"^^xsd:string .
SAO:1749953771 a owl:Class ;
rdfs:label "Tail Portion"^^xsd:string ;
skos:prefLabel "Tail Portion"^^xsd:string ;
skos:definition "Elongated process, devoid of cytoplasmic extensions, that courses through the hypothalamic nucleis to form small endfoot processes that terminate either on blood vessels or at the pial surface of the brain (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:877341397 ;
owl:disjointWith SAO:401910342,
SAO:2064469343 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1749953771"^^xsd:string .
SAO:1770195789 a owl:Class ;
rdfs:label "Axon"^^xsd:string ;
skos:prefLabel "Axon"^^xsd:string ;
NIFRID:synonym "Fiber"^^xsd:string ;
skos:definition "Cell appendage of a neuron that consists of an axon hillock, an axon proper, axon collaterals and an axon terminal (FMA)"^^xsd:string,
"The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals which are the site of storage and release of neurotransmitter (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:867568886 ;
NIFRID:modifiedDate "May 5, 2010"^^xsd:string ;
NIFRID:gene_Ontology_ID "0030424"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1770195789"^^xsd:string ;
NIFRID:umls_ID "C0004461"^^xsd:string ;
skos:example .
SAO:1784069613 a owl:Class ;
rdfs:label "Synaptic Component"^^xsd:string ;
skos:prefLabel "Synaptic Component"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1938587839,
SAO:1969557946 ;
NIFRID:sao_ID "sao1784069613"^^xsd:string .
SAO:1791490892 a owl:Class ;
owl:deprecated true ;
rdfs:label "Regional Part Of Myelinated Axon"^^xsd:string ;
skos:prefLabel "Regional Part Of Myelinated Axon"^^xsd:string ;
rdfs:subClassOf owl:DeprecatedClass ;
rdfs:comment "This class has been retired."^^xsd:string ;
NIFRID:modifiedDate "May 28, 2009"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:hasFormerParentClass SAO:183270081 ;
NIFRID:sao_ID "sao1791490892"^^xsd:string .
SAO:1799103720 a owl:Class ;
rdfs:label "Dendritic Spine"^^xsd:string ;
skos:prefLabel "Dendritic Spine"^^xsd:string ;
skos:definition "Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1145756102 ;
owl:disjointWith SAO:18239917,
SAO:2048514053 ;
NIFRID:gene_Ontology_ID "0043197"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1799103720"^^xsd:string ;
NIFRID:umls_ID "C0872341"^^xsd:string ;
skos:example ,
.
SAO:1804523077 a owl:Class ;
rdfs:label "Mitochondrial Matrix"^^xsd:string ;
skos:prefLabel "Mitochondrial Matrix"^^xsd:string ;
skos:definition "The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes concerned with fatty-acid oxidation and enzymes of the tricarboxylic acid cycle (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:666410040 ;
owl:disjointWith SAO:333328131 ;
NIFRID:gene_Ontology_ID "0005759"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1804523077"^^xsd:string ;
NIFRID:umls_ID "C0230843"^^xsd:string .
SAO:1819020575 a owl:Class ;
rdfs:label "Regional Part Of Cell Component"^^xsd:string ;
skos:prefLabel "Regional Part Of Cell Component"^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
owl:disjointWith SAO:340271629 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1819020575"^^xsd:string .
SAO:1819509473 a owl:Class ;
rdfs:label "RER Lumen"^^xsd:string ;
skos:prefLabel "RER Lumen"^^xsd:string ;
NIFRID:synonym "rough endoplasmic reticulum lumen"^^xsd:string ;
skos:definition "The volume enclosed by the membranes of the rough endoplasmic reticulum (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:254777664,
SAO:343550527,
SAO:797538226,
SAO:927884761,
SAO:1908934319,
SAO:1956231674 ;
NIFRID:gene_Ontology_ID "0048237"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1819509473"^^xsd:string .
SAO:1820400233 a owl:Class ;
rdfs:label "Nucleolus"^^xsd:string ;
skos:prefLabel "Nucleolus"^^xsd:string ;
skos:definition "A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1499850686 ;
owl:disjointWith SAO:95019936,
SAO:220861693,
SAO:505137457,
SAO:661522542 ;
NIFRID:gene_Ontology_ID "0005730"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1820400233"^^xsd:string ;
NIFRID:umls_ID "C0007609"^^xsd:string ;
skos:example ,
.
SAO:1825845900 a owl:Class ;
rdfs:label "Crista Junction"^^xsd:string ;
skos:prefLabel "Crista Junction"^^xsd:string ;
skos:definition "Tubular structures of relatively uniform size that connect mitochondrial cristae to the inner mitchondrial membrane (Perkins and Ellisman, 2003)."^^xsd:string ;
rdfs:subClassOf SAO:1367457321 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1825845900"^^xsd:string .
SAO:1828894864 a owl:Class ;
rdfs:label "Cell Process"^^xsd:string ;
skos:prefLabel "Cell Process"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:82111036,
SAO:864921383,
SAO:895885284 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1828894864"^^xsd:string .
SAO:1841764412 a owl:Class ;
rdfs:label "Pars Fibrosa"^^xsd:string ;
skos:prefLabel "Pars Fibrosa"^^xsd:string ;
skos:definition "Portion of the nucleolus composed of densely matted filaments with scattered dark granules (Palay and Chan-Palay, 1974)."^^xsd:string ;
rdfs:subClassOf SAO:113580911 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1841764412"^^xsd:string ;
NIFRID:umls_ID "C0230581"^^xsd:string .
SAO:1842028314 a owl:Class ;
rdfs:label "SER Subcomponent"^^xsd:string ;
skos:prefLabel "SER Subcomponent"^^xsd:string ;
rdfs:subClassOf SAO:628508602 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1842028314"^^xsd:string .
SAO:1846835077 a owl:Class ;
rdfs:label "Microtubule"^^xsd:string ;
skos:prefLabel "Microtubule"^^xsd:string ;
skos:definition "Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1635329413 ;
owl:disjointWith SAO:952483289,
SAO:2006047981 ;
NIFRID:gene_Ontology_ID "0005874"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1846835077"^^xsd:string ;
NIFRID:umls_ID "C0026046"^^xsd:string ;
skos:example ,
.
SAO:1858501007 a owl:Class ;
rdfs:label "Bridge Contact Site"^^xsd:string ;
skos:prefLabel "Bridge Contact Site"^^xsd:string ;
skos:definition "Site of contact between the inner and outer mitochondrial membrane found in neuronal mitochondria; may play a role in maintaining the structural integrity of the inner and outer boundary membranes (Perkins and Ellisman, 2005)."^^xsd:string ;
rdfs:subClassOf SAO:1367457321 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1858501007"^^xsd:string .
SAO:1860313010 a owl:Class ;
rdfs:label "Mitochondrion"^^xsd:string ;
skos:prefLabel "Mitochondrion"^^xsd:string ;
NIFRID:synonym "mitochondria"^^xsd:string ;
skos:definition "A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:451912436,
SAO:499555322,
SAO:585356902,
SAO:725931194,
SAO:2045955158 ;
NIFRID:gene_Ontology_ID "0005739"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1860313010"^^xsd:string ;
NIFRID:umls_ID "C0026237"^^xsd:string ;
skos:example ,
.
SAO:1863852493 a owl:Class ;
rdfs:label "Glial Filament"^^xsd:string ;
skos:prefLabel "Glial Filament"^^xsd:string ;
rdfs:subClassOf SAO:952483289 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1863852493"^^xsd:string .
SAO:1872343973 a owl:Class ;
rdfs:label "Microtubule Fascicle"^^xsd:string ;
skos:prefLabel "Microtubule Fascicle"^^xsd:string ;
skos:definition "Refers to a bundle of closely apposed microtubules running parallel to each other."^^xsd:string ;
rdfs:subClassOf SAO:1846835077 ;
owl:disjointWith SAO:248349196 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1872343973"^^xsd:string .
SAO:1877927224 a owl:Class ;
rdfs:label "Apical Pole Of Neuron"^^xsd:string ;
skos:prefLabel "Apical Pole Of Neuron"^^xsd:string ;
skos:definition "Portion of a cell soma closest to the point where the apical dendrite emerges."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490,
SAO:1922892319 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1877927224"^^xsd:string .
SAO:1881364067 a owl:Class ;
rdfs:label "Rough Endoplasmic Reticulum"^^xsd:string ;
skos:prefLabel "Rough Endoplasmic Reticulum"^^xsd:string ;
NIFRID:synonym "Nissl substance"^^xsd:string ;
skos:definition "The rough (or granular) ER has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1036339110 ;
owl:disjointWith SAO:710427438 ;
NIFRID:gene_Ontology_ID "0005791"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1881364067"^^xsd:string ;
NIFRID:umls_ID "C0230779"^^xsd:string .
SAO:1884931180 a owl:Class ;
rdfs:label "Ribbon Synapse"^^xsd:string ;
skos:prefLabel "Ribbon Synapse"^^xsd:string ;
skos:definition "Type of synapse characterized by an electron-dense ribbon, lamella (bar) or spherical body in the presynaptic process cytoplasm (Sjostrand, 1953; Ladman, 1958; Gray and Pease, 1971). It usually sits in or just above an evaginated ridge of the terminal membrane...\" - Dowling (1987)"^^xsd:string ;
rdfs:subClassOf SAO:289211478,
[ a owl:Restriction ;
owl:onProperty hasPart: ;
owl:someValuesFrom SAO:1111202255 ],
[ a owl:Restriction ;
owl:onProperty hasPart: ;
owl:someValuesFrom SAO:1488888179 ] ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1884931180"^^xsd:string .
SAO:1890444066 a owl:Class ;
rdfs:label "Schwann Cell Microvillus"^^xsd:string ;
skos:prefLabel "Schwann Cell Microvillus"^^xsd:string ;
skos:definition "Small finger-like extension of the Schwann cell that contact the nodal membrane but are not closely apposed to each other like the paranodal lops (Sosinsky et al., 2005)"^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1890444066"^^xsd:string .
SAO:1894609662 a owl:Class ;
rdfs:label "Regional Part Of Lewy Body"^^xsd:string ;
skos:prefLabel "Regional Part Of Lewy Body"^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1894609662"^^xsd:string .
SAO:1899375636 a owl:Class ;
rdfs:label "Mitochondrial Lumen"^^xsd:string ;
skos:prefLabel "Mitochondrial Lumen"^^xsd:string ;
NIFRID:synonym "Inner Mitochondrial Compartment (from Peters, Palay, and Webster)"^^xsd:string ;
skos:definition "Interior portion of mitochondrion bounded by the inner mitochondrial membrane and cristae membranes and containing the mitochondrial matrix. Does not include the crista or crista lumen."^^xsd:string ;
rdfs:subClassOf SAO:343550527 ;
owl:disjointWith SAO:508958414 ;
NIFRID:gene_Ontology_ID "0031980"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao-1899375636"^^xsd:string .
SAO:1908934319 a owl:Class ;
rdfs:label "Intranuclear Membrane Space"^^xsd:string ;
skos:prefLabel "Intranuclear Membrane Space"^^xsd:string ;
skos:definition "The space between the inner and outer nuclear membranes"^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:254777664,
SAO:343550527,
SAO:797538226,
SAO:927884761,
SAO:1956231674 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1908934319"^^xsd:string .
SAO:1911631652 a owl:Class ;
rdfs:label "Pre-synaptic Active Zone Component"^^xsd:string ;
skos:prefLabel "Pre-synaptic Active Zone Component"^^xsd:string ;
rdfs:subClassOf SAO:386529203 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1911631652"^^xsd:string .
SAO:1922892319 a owl:Class ;
rdfs:label "Intercellular Junction Site"^^xsd:string ;
skos:prefLabel "Intercellular Junction Site"^^xsd:string ;
skos:definition "The site of cell-cell contact containing a morphologically identified junctional complex joining the two cells."^^xsd:string ;
rdfs:subClassOf BFO:0000029 ;
owl:disjointWith SAO:553711217,
SAO:596411490 ;
rdfs:comment "The Cell_Cell_Contact_Zone and the Intercellular_Junction are not the same. The junction only refers to the bridging complex and not the larger region where the junction resides. The intercellular_Junction is part of a larger cell-cell contact zone. The cell-cell contact zone may also contain additional junctions and cellular machinery related to the function of the junction."^^xsd:string ;
NIFRID:gene_Ontology_ID "0005911"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:definition_incomplete ;
NIFRID:sao_ID "sao1922892319"^^xsd:string .
SAO:1925368674 a owl:Class ;
rdfs:label "Pinocytic Vesicle"^^xsd:string ;
skos:prefLabel "Pinocytic Vesicle"^^xsd:string ;
rdfs:subClassOf SAO:1362520468 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1925368674"^^xsd:string .
SAO:1933817066 a owl:Class ;
rdfs:label "Mitochondrial Adhaerens Complex"^^xsd:string ;
skos:prefLabel "Mitochondrial Adhaerens Complex"^^xsd:string ;
NIFRID:synonym "mitochondrial-associated adherens complex"^^xsd:string ;
NIFRID:abbrev "MAC"^^xsd:string ;
skos:definition "An adherens plaque attached by filamentous strands to mitochondrion found in large synaptic terminals in the calyc of Held. The peripheral membrane facing the plaque is flattened and faces the synaptic presynaptic membrane (Perkins and Ellisman, 2005)."^^xsd:string ;
rdfs:subClassOf SAO:666410040 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1933817066"^^xsd:string .
SAO:1938587839 a owl:Class ;
rdfs:label "Subplasmalemmal Coating"^^xsd:string ;
skos:prefLabel "Subplasmalemmal Coating"^^xsd:string ;
skos:definition "Electron dense material observed coating the cytoplasmic face of the plasma membrane in certain regions of a neuron, e.g., the axon initial segment; the nodal membrane at the Node of Ranvier"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606,
SAO:1969557946 ;
NIFRID:modifiedDate "2007-02-23"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:definition_incomplete ;
NIFRID:sao_ID "sao1938587839"^^xsd:string .
SAO:1939999134 a owl:Class ;
rdfs:label "Zonula Occludens"^^xsd:string ;
skos:prefLabel "Zonula Occludens"^^xsd:string ;
NIFRID:synonym "tight junction"^^xsd:string ;
skos:definition "A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
owl:disjointWith SAO:427941916,
SAO:946766835,
SAO:1956738165 ;
NIFRID:gene_Ontology_ID "0005923"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1939999134"^^xsd:string .
SAO:1943947957 a owl:Class ;
rdfs:label "Peg And Socket Contact"^^xsd:string ;
skos:prefLabel "Peg And Socket Contact"^^xsd:string ;
skos:definition "Contact between endothelial cell and pericyte consisting of membrane invaginations extending from either cell type, which contain tight-, gap-, and adherence junctions (Armulik et al., Circ Res 97: 512, 2005)."^^xsd:string ;
rdfs:subClassOf SAO:1299635018 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1943947957"^^xsd:string .
SAO:1950673097 a owl:Class ;
rdfs:label "Schaffer Collateral"^^xsd:string ;
skos:prefLabel "Schaffer Collateral"^^xsd:string ;
skos:definition "Axon collateral of CA3 pyramidal neurons that project to CA1 and synapse in the zona radiatum."^^xsd:string ;
rdfs:subClassOf SAO:1470140754 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1950673097"^^xsd:string .
SAO:1956231674 a owl:Class ;
rdfs:label "Golgi Lumen"^^xsd:string ;
skos:prefLabel "Golgi Lumen"^^xsd:string ;
rdfs:subClassOf SAO:1289190043 ;
owl:disjointWith SAO:254777664,
SAO:343550527,
SAO:797538226,
SAO:927884761 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1956231674"^^xsd:string .
SAO:1956738165 a owl:Class ;
rdfs:label "Macular Adhaerentia"^^xsd:string ;
skos:prefLabel "Macular Adhaerentia"^^xsd:string ;
rdfs:subClassOf SAO:1922892319 ;
owl:disjointWith SAO:427941916,
SAO:946766835 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:pendingActionNote "Look into the relationship of Macular and zonula adhaerentia and determine whether they are all subclasses of adhaerent junction"^^xsd:string ;
NIFRID:sao_ID "sao1956738165"^^xsd:string .
SAO:1969557946 a owl:Class ;
rdfs:label "Coated Pit"^^xsd:string ;
skos:prefLabel "Coated Pit"^^xsd:string ;
skos:definition "Specialized sites on the plasma membrane exhibiting a clathrin coat; likely vesicles in the process of pinching off (Conner and Schmid, 2003)."^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
owl:disjointWith SAO:221389602,
SAO:628508602,
SAO:730872736,
SAO:787716553,
SAO:830981606 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1969557946"^^xsd:string ;
NIFRID:umls_ID "C0009143"^^xsd:string .
SAO:1970895398 a owl:Class ;
rdfs:label "Cell Regional Part Aggregate Object"^^xsd:string ;
skos:prefLabel "Cell Regional Part Aggregate Object"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:508165343,
SAO:991156472 ;
NIFRID:sao_ID "sao1970895398"^^xsd:string .
SAO:1974433376 a owl:Class ;
rdfs:label "Regional Part Of Epithelial Cell"^^xsd:string ;
skos:prefLabel "Regional Part Of Epithelial Cell"^^xsd:string ;
rdfs:subClassOf SAO:340271629 ;
owl:disjointWith SAO:877341397 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao1974433376"^^xsd:string ;
NIFRID:umls_ID "C0932419"^^xsd:string .
SAO:2006047981 a owl:Class ;
rdfs:label "Microfilament"^^xsd:string ;
skos:prefLabel "Microfilament"^^xsd:string ;
skos:definition "A two-stranded helical polymer of the protein actin. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane. Reference(s): ISBN:0198506732 PMID:10666339 (GO)"^^xsd:string ;
rdfs:subClassOf SAO:1635329413 ;
owl:disjointWith SAO:952483289 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2006047981"^^xsd:string ;
NIFRID:umls_ID "C0025979"^^xsd:string .
SAO:2007137787 a owl:Class ;
rdfs:label "Axon Terminal"^^xsd:string ;
skos:prefLabel "Axon Terminal"^^xsd:string ;
skos:definition "The distal terminations of axons which are specialized for the release of neurotransmitters. Also included are varicosities along the course of axons which have similar specializations and also release transmitters. Presynaptic terminals in both the central and peripheral nervous systems are included (MSH)."^^xsd:string ;
rdfs:subClassOf SAO:280355188 ;
owl:disjointWith SAO:203987954,
SAO:256000789,
SAO:627227260 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2007137787"^^xsd:string ;
skos:example .
SAO:2017162875 a owl:Class ;
rdfs:label "Age Associated"^^xsd:string ;
skos:prefLabel "Age Associated"^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
rdfs:comment "Need to look this one up and see what this really meant."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2017162875"^^xsd:string .
SAO:2019617624 a owl:Class ;
rdfs:label "Regional Part Of RER"^^xsd:string ;
skos:prefLabel "Regional Part Of RER"^^xsd:string ;
skos:definition "Specialized ribosome-free subdomains of synthetic endoplasmic reticulum where cargo is concentrated into vesicles tha bud from the endoplasmic reticulum for tranport to the Golgi (Horton and Ehlers, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:1819020575 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2019617624"^^xsd:string .
SAO:2031592629 a owl:Class ;
rdfs:label "Neurosecretory Vesicle"^^xsd:string ;
skos:prefLabel "Neurosecretory Vesicle"^^xsd:string ;
skos:definition "Large dense cored vesicles, up to 150-200 nm in diameter found in neurosecretory cells in the hypothalamus. The electron dense appearance is dependent upon fixation (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:478230652 ;
owl:disjointWith SAO:772007592 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2031592629"^^xsd:string .
SAO:2034472720 a owl:Class ;
rdfs:label "Dendritic Shaft"^^xsd:string ;
skos:prefLabel "Dendritic Shaft"^^xsd:string ;
skos:definition "Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:1590928667 ;
NIFRID:bonfireID "BF_C000106"^^xsd:string ;
NIFRID:gene_Ontology_ID "0043198"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2034472720"^^xsd:string ;
skos:example .
SAO:2038461087 a owl:Class ;
rdfs:label "Active Zone Plasma Membrane"^^xsd:string ;
skos:prefLabel "Active Zone Plasma Membrane"^^xsd:string ;
skos:definition "Plasma membrane juxtaposed to the PSD where synaptic vesicle fusion occurs (Zhai and Bellen, 2004)."^^xsd:string ;
rdfs:subClassOf SAO:1911631652 ;
owl:disjointWith SAO:494258938 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2038461087"^^xsd:string .
SAO:2045955158 a owl:Class ;
rdfs:label "Multivesicular Body"^^xsd:string ;
skos:prefLabel "Multivesicular Body"^^xsd:string ;
skos:definition "A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm (Gene Ontology)."^^xsd:string ;
rdfs:subClassOf SAO:414196390 ;
owl:disjointWith SAO:451912436,
SAO:499555322,
SAO:585356902,
SAO:725931194 ;
NIFRID:gene_Ontology_ID "0005771"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2045955158"^^xsd:string ;
NIFRID:umls_ID "C0230825"^^xsd:string ;
skos:example ,
.
SAO:2048514053 a owl:Class ;
rdfs:label "Somatic Spine"^^xsd:string ;
skos:prefLabel "Somatic Spine"^^xsd:string ;
skos:definition "Spine emanating from the cell soma."^^xsd:string ;
rdfs:subClassOf SAO:1145756102 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2048514053"^^xsd:string ;
skos:example .
SAO:2048701763 a owl:Class ;
rdfs:label "Perivascular Endfoot"^^xsd:string ;
skos:prefLabel "Perivascular Endfoot"^^xsd:string ;
rdfs:subClassOf SAO:388182739 ;
rdfs:comment "We are unclear why this is causing an inconsistency error."^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2048701763"^^xsd:string .
SAO:2064469343 a owl:Class ;
rdfs:label "Vascular Endfoot"^^xsd:string ;
skos:prefLabel "Vascular Endfoot"^^xsd:string ;
rdfs:subClassOf SAO:877341397 ;
owl:disjointWith SAO:401910342 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2064469343"^^xsd:string ;
skos:example .
SAO:2108323256 a owl:Class ;
rdfs:label "Pre-synaptic Site"^^xsd:string ;
skos:prefLabel "Pre-synaptic Site"^^xsd:string ;
rdfs:subClassOf SAO:946766835 ;
NIFRID:sao_ID "sao2108323256"^^xsd:string .
SAO:2114874506 a owl:Class ;
rdfs:label "Membrane Stack"^^xsd:string ;
skos:prefLabel "Membrane Stack"^^xsd:string ;
skos:definition "A configuration of ER found in Purkinje cells in the cerebellum and in axons in the lateral vestibular nucleus, consisting of a number of parallel and interconnecting tubules whose outer surfaces are covered by particles or ringlike structures (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2114874506"^^xsd:string .
SAO:2127666702 a owl:Class ;
rdfs:label "Mesaxon"^^xsd:string ;
skos:prefLabel "Mesaxon"^^xsd:string ;
skos:definition "Portion of the ensheathing process (either myelin or non-myelin) where the enveloping lips of the ensheathing cell come together so that their apposed plasma membranes run parallel to each other, separated by a cleft 12 nm wide (Peters, Palay and Webster, 1991)."^^xsd:string ;
rdfs:subClassOf SAO:195217619 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2127666702"^^xsd:string .
SAO:2128156969 a owl:Class ;
rdfs:label "Spine Mat"^^xsd:string ;
skos:prefLabel "Spine Mat"^^xsd:string ;
skos:definition "A configuration of somatic spines found on ciliary ganglion neurons in the embryonic and adult brain consisting of patches of closely spaced spines lying flat against the soma. (Shoop et al., 2000)."^^xsd:string ;
rdfs:subClassOf SAO:1970895398 ;
NIFRID:createdDate "2007-02-09"^^xsd:string ;
dc:contributor "Maryann Martone"^^xsd:string ;
NIFRID:sao_ID "sao2128156969"^^xsd:string .
SAO:2135015805 a owl:Class ;
rdfs:label "Extracellular Surface"^^xsd:string ;
skos:prefLabel "Extracellular Surface"^^xsd:string ;
rdfs:subClassOf SAO:1329750433 ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2135015805"^^xsd:string .
SAO:2254405550 a owl:Class ;
rdfs:label "Population"^^xsd:string ;
skos:prefLabel "Population"^^xsd:string ;
skos:definition "A collection of independent organismal entities engaged in some form of spatio-temporal interaction or aggregate behavior"^^xsd:string ;
rdfs:subClassOf BFO:0000027 ;
NIFRID:createdDate "2006-09-07"^^xsd:string ;
dc:contributor "Bill Bug"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2254405550"^^xsd:string .
SAO:2409833926 a owl:Class ;
rdfs:label "Neurofibrillary Tangle"^^xsd:string ;
skos:prefLabel "Neurofibrillary Tangle"^^xsd:string ;
skos:definition "Intracellular mass of paired, hellically wound protein filaments (PHF) lying in the cytoplasm of neuronal cell bodies and neuritic cell processes. They contain an abnormally phosporylated form of a microtuble associated with protein, tau."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao2409833926"^^xsd:string .
SAO:3012335077 a owl:Class ;
rdfs:label "Junction Complex"^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 .
SAO:3089754107 a owl:Class ;
rdfs:label "RER Membrane"^^xsd:string ;
skos:prefLabel "RER Membrane"^^xsd:string ;
rdfs:subClassOf SAO:830981606 ;
NIFRID:sao_ID "sao3089754107"^^xsd:string .
SAO:3826089237 a owl:Class ;
rdfs:label "Aggregate Object"^^xsd:string ;
skos:prefLabel "Aggregate Object"^^xsd:string ;
rdfs:subClassOf BFO:0000027 ;
dc:contributor "Sarah Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao3826089237"^^xsd:string .
SAO:4040591221 a owl:Class ;
rdfs:label "Cortical Lewy Body"^^xsd:string ;
skos:prefLabel "Cortical Lewy Body"^^xsd:string ;
skos:definition "Lesion that is less well defined than a Classical Lewy Body and lacks a halo."^^xsd:string ;
rdfs:subClassOf SAO:4933778419 ;
rdfs:comment "has Regional Part some Regional_Part_of_Lewy_Body restriction violated because Cortical Lewy Body lacks halo."^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4040591221"^^xsd:string .
SAO:4749542545 a owl:Class ;
rdfs:label "Classical Lewy Body"^^xsd:string ;
skos:prefLabel "Classical Lewy Body"^^xsd:string ;
skos:definition "Eosinophilic cytoplasmic lesion, 5 to 15 micrometers in diameter, with a dense eosinphilic core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils."^^xsd:string ;
rdfs:subClassOf SAO:4933778419 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4749542545"^^xsd:string .
SAO:4785563283 a owl:Class ;
rdfs:label "Amyloid Aggregate"^^xsd:string ;
skos:prefLabel "Amyloid Aggregate"^^xsd:string ;
skos:definition "Insoluble fibrous protein aggregation sharing specific structural traits."^^xsd:string ;
rdfs:subClassOf SAO:7016027781 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4785563283"^^xsd:string .
SAO:4933778419 a owl:Class ;
rdfs:label "Lewy Body"^^xsd:string ;
skos:prefLabel "Lewy Body"^^xsd:string ;
skos:definition "Neuronal inclusion commonly found in damaged neurons. A spherical mass that dispaces other cells composed of abnormally phosphorylated, neurofilament proteins aggregated with ubiquitin and alpha-synuclein. They are intracytoplasmic."^^xsd:string ;
rdfs:subClassOf SAO:120573470 ;
rdfs:comment "there are two morphological types: classical (brain stem) and cortical Lewy bodies"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao4933778419"^^xsd:string .
SAO:5051906853 a owl:Class ;
rdfs:label "Fibril"^^xsd:string ;
skos:prefLabel "Fibril"^^xsd:string ;
skos:definition "A minute fibril or filament."^^xsd:string ;
rdfs:subClassOf SAO:7561423738 ;
rdfs:comment "This is a placeholder."^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao5051906853"^^xsd:string .
SAO:5764355747 a owl:Class ;
rdfs:label "Corona"^^xsd:string ;
skos:prefLabel "Corona"^^xsd:string ;
NIFRID:synonym "Halo"^^xsd:string ;
skos:definition "The periphery of the Lewy Body. In Parkinson's Disease, it contains sperical accumulations of filaments arrange in a loose, radiating array."^^xsd:string ;
rdfs:subClassOf SAO:1894609662 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao5764355747"^^xsd:string .
SAO:6433132645 a owl:Class ;
rdfs:label "Cellular Membrane"^^xsd:string ;
skos:prefLabel "Cellular Membrane"^^xsd:string ;
rdfs:subClassOf SAO:1337158144 ;
NIFRID:sao_ID "sao6433132645"^^xsd:string .
SAO:6587439252 a owl:Class ;
rdfs:label "Core"^^xsd:string ;
skos:prefLabel "Core"^^xsd:string ;
skos:definition "The center portion of the Lewy Body. In Parkinson's Disease, it contains a matted meshwork of filaments."^^xsd:string ;
rdfs:subClassOf SAO:1894609662 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao6587439252"^^xsd:string .
SAO:6603990120 a owl:Class ;
rdfs:label "Paired Helical Filament"^^xsd:string ;
skos:prefLabel "Paired Helical Filament"^^xsd:string ;
NIFRID:synonym "PHF"^^xsd:string ;
skos:definition "Two threads of tau protein that are wound around each other."^^xsd:string ;
rdfs:subClassOf SAO:7561423738 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:sao_ID "sao6603990120"^^xsd:string .
SAO:7016027781 a owl:Class ;
rdfs:label "Protein Aggregate"^^xsd:string ;
skos:prefLabel "Protein Aggregate"^^xsd:string ;
skos:definition "An insoluble mass of misfolded proteins."^^xsd:string ;
rdfs:subClassOf SAO:3826089237 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao7016027781"^^xsd:string .
SAO:7474011676 a owl:Class ;
rdfs:label "Alpha-Synuclein Fibril"^^xsd:string ;
skos:prefLabel "Alpha-Synuclein Fibril"^^xsd:string ;
skos:definition "Insoluble fibrils that form in pathological conditions characterized by Lewy bodies, such as Parkinson's disease, dementia with Lewy bodies, and multiple system atrophy. Alpha-synuclein is the primary structural component."^^xsd:string ;
rdfs:subClassOf SAO:5051906853 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao7474011676"^^xsd:string .
SAO:7547390221 a owl:Class ;
rdfs:label "Collagen Fibril"^^xsd:string ;
skos:prefLabel "Collagen Fibril"^^xsd:string ;
skos:definition "Delicate fibrils of collagen in connective tissue. It is composed of molecules of tropocollagen aggregated in linear array."^^xsd:string ;
rdfs:subClassOf SAO:5051906853 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao7547390221"^^xsd:string .
SAO:7561423738 a owl:Class ;
rdfs:label "Filament"^^xsd:string ;
skos:prefLabel "Filament"^^xsd:string ;
NIFRID:synonym "Protein Filament"^^xsd:string ;
rdfs:subClassOf SAO:3826089237 ;
rdfs:comment "This is a placeholder. This refers to a protein configuration, but we think it belongs elsewhere. A fibril is actually a minute fiber or filament. Filament could refer to protein filament. A long chain of proteins, such as those found in hair, muscle, or in flagella"^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao7561423738"^^xsd:string .
SAO:8444068431 a owl:Class ;
rdfs:label "Autolysosome"^^xsd:string ;
skos:prefLabel "Autolysosome"^^xsd:string ;
NIFRID:synonym "Autophagolysosome, degrading autophagic vacuole (AVd)"^^xsd:string ;
skos:definition "A type of secondary lysosome in which a primary lysosome has fused with the outer membrane of an autophagosome. It is involved in the second step of autophagy in which it degrades contents with acidic lysosomal hydrolases."^^xsd:string ;
rdfs:subClassOf SAO:1549842807 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao8444068431"^^xsd:string .
SAO:8663416959 a owl:Class ;
rdfs:label "Autophagosome"^^xsd:string ;
skos:prefLabel "Autophagosome"^^xsd:string ;
NIFRID:synonym "autophagic vacuole, initial autophagic vacuole (AVi)"^^xsd:string ;
skos:definition "A vesicle with a double membrance derived from the Endoplasmic Reticulum that encloses cytoplasmic material and organelles to be degraded. Its formation is the first step of the process of autophagy."^^xsd:string ;
rdfs:subClassOf SAO:221389602 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao8663416959"^^xsd:string .
SAO:9117790637 a owl:Class ;
rdfs:label "Extracellular Structure"^^xsd:string ;
skos:prefLabel "Extracellular Structure"^^xsd:string ;
skos:definition "Structure that exists outside the cell."^^xsd:string ;
rdfs:subClassOf NLXSUB:100315 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9117790637"^^xsd:string .
SAO:9137852997 a owl:Class ;
rdfs:label "Plaque"^^xsd:string ;
skos:prefLabel "Plaque"^^xsd:string ;
skos:definition "A formation or growth of cells."^^xsd:string ;
rdfs:subClassOf SAO:9117790637 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9137852997"^^xsd:string .
SAO:9515821206 a owl:Class ;
rdfs:label "Neuritic plaque"^^xsd:string ;
skos:prefLabel "Neuritic Plaque"^^xsd:string ;
skos:definition "A characteristic form of amyloid plaque. Has an extracellular core of amyloid fibrils surrounded by dystrophic dendrites and axons, some of which contain protein filaments, activated microglia and reactive astrocytes."^^xsd:string ;
rdfs:subClassOf SAO:9137852997 ;
rdfs:comment "We need to check if any plaques do not amyloid and if amyloid is beta. We are not sure if there is a distinction between Neuritic plaque and Senile plaque."^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9515821206"^^xsd:string .
SAO:9537723288 a owl:Class ;
rdfs:label "Neuropil Thread"^^xsd:string ;
skos:prefLabel "Neuropil Thread"^^xsd:string ;
skos:definition "Abnormal structures located in distal dendrites. Filamentous bundles made up of straight and paried helical filaments which contain ubiquitin and tau."^^xsd:string ;
rdfs:subClassOf SAO:3826089237 ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9537723288"^^xsd:string .
SAO:9615155060 a owl:Class ;
rdfs:label "Senile Plaque"^^xsd:string ;
skos:prefLabel "Senile Plaque"^^xsd:string ;
NIFRID:synonym "amyloid plaques, senile druse, braindruse"^^xsd:string ;
skos:definition "Extracellular deposits of Beta-amyloid / 8-10 nm amyloid fibrils that are polymers of amyloid-Beta protein. They are located in grey matter and associated with degenerative neural structures and an abundance of microglia and astrocytes."^^xsd:string ;
rdfs:subClassOf SAO:9137852997 ;
rdfs:comment "We are not sure if there is a distinction between Neuritic plaque and Senile plaque."^^xsd:string ;
dc:contributor "Sarah M. Maynard"^^xsd:string ;
NIFRID:hasCurationStatus NIFRID:uncurated ;
NIFRID:sao_ID "sao9615155060"^^xsd:string ;
skos:example .
SAO:17780464455 a owl:Class ;
rdfs:label "Intercellular Gap Janction Channel"^^xsd:string ;
skos:definition "Junctional complex consisting of two connexons that come together to form a communicating pore between two cells"^^xsd:string ;
rdfs:subClassOf SAO:3012335077 .
### Annotations
dc:contributor rdfs:isDefinedBy dc: .
dc:title rdfs:isDefinedBy dc: .
skos:altLabel rdfs:isDefinedBy .
skos:changeNote rdfs:isDefinedBy .
skos:definition rdfs:isDefinedBy .
skos:example rdfs:isDefinedBy .
skos:prefLabel rdfs:isDefinedBy .
### Serialized using the pyontutils deterministic serializer v1.1.3